Functional clusters

Information

  • Type InterPro
  • Description Late blight resistance protein R1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold767 5 CH_can_130 6 10 0.000000000000703409
Capsicum annuum PGAv.1.6.scaffold282 5 CH_can_750 3 7 0.000407536
Nicotiana tabacum Nitab4.5_0000703 5 CH_nta_22 6 8 0.000000000000123947
Petunia axillaris Peaxi162Scf00222 5 CH_pax_105 8 74 0.000000000304248
Petunia axillaris Peaxi162Scf00378 5 CH_pax_239 4 6 0.000000492371
Petunia axillaris Peaxi162Scf00541 5 CH_pax_28 7 7 2.51281e-17
Solanum lycopersicum SL4.0ch05 5 CH_sly_163 6 39 0.000000000046983
Solanum pennellii Spenn-ch05 5 CH_spe_168 4 5 0.000000000653311
Solanum tuberosum ST4.03ch05 5 CH_stu_151 7 64 0.00000000000150184
Capsicum annuum PGAv.1.6.scaffold767 6 CH_can_130 6 10 0.000000000000703409
Capsicum annuum PGAv.1.6.scaffold282 6 CH_can_750 3 7 0.000407536
Nicotiana tabacum Nitab4.5_0000703 6 CH_nta_22 6 8 0.000000000000123947
Petunia axillaris Peaxi162Scf00222 6 CH_pax_105 8 74 0.000000000304248
Petunia axillaris Peaxi162Scf00378 6 CH_pax_239 4 6 0.000000492371
Petunia axillaris Peaxi162Scf00541 6 CH_pax_28 7 7 2.51281e-17
Solanum lycopersicum SL4.0ch05 6 CH_sly_163 6 39 0.000000000046983
Solanum pennellii Spenn-ch05 6 CH_spe_168 4 5 0.000000000653311
Solanum tuberosum ST4.03ch05 6 CH_stu_151 7 64 0.00000000000150184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001