Functional clusters
Information
- Type InterPro
- Description Protein of unknown function DUF3339
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_246 | 3 | 3 | 0.000000352118 |
| Brassica carinata | ChrC03 | 5 | CH_bca_1025 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrC02 | 5 | CH_bca_1026 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1027 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1028 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrB02 | 5 | CH_bca_1029 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrB07 | 5 | CH_bca_1030 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrB06 | 5 | CH_bca_1370 | 3 | 5 | 0.0000845335 |
| Brassica carinata | ChrC05 | 5 | CH_bca_429 | 4 | 5 | 0.0000000180764 |
| Brassica napus | A04 | 5 | CH_bna_704 | 3 | 3 | 0.00000369001 |
| Brassica napus | C04 | 5 | CH_bna_705 | 3 | 3 | 0.00000369001 |
| Brassica oleracea | C4 | 5 | CH_bol_343 | 3 | 3 | 0.00000130772 |
| Brassica rapa | A04 | 5 | CH_bra_256 | 3 | 3 | 0.00000367707 |
| Camellia sinensis var. sinensis | Chr5 | 5 | CH_camsi_533 | 3 | 3 | 0.000000176627 |
| Cannabis sativa | NC_044379.1 | 5 | CH_cansat_117 | 4 | 4 | 0.000000000178389 |
| Cannabis sativa | NC_044372.1 | 5 | CH_cansat_286 | 4 | 26 | 0.00000265577 |
| Capsicum annuum | PGAv.1.6.scaffold473 | 5 | CH_can_110 | 5 | 5 | 0.0000000000000880461 |
| Coffea canephora | chr7 | 5 | CH_ccan_150 | 3 | 10 | 0.0000000326478 |
| Coffea canephora | chr11 | 5 | CH_ccan_675 | 2 | 6 | 0.00063882 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_83 | 6 | 6 | 1.75579e-17 |
| Carpinus fangiana | Cfa03 | 5 | CH_cfa_175 | 3 | 3 | 0.00000000860393 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_322 | 3 | 3 | 0.000000860004 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_130 | 5 | 5 | 0.000000000000221662 |
| Carya illinoinensis | Chr04 | 5 | CH_cil_234 | 4 | 4 | 0.000000000715171 |
| Corchorus olitorius | AWUE01017164.1 | 5 | CH_col_226 | 2 | 2 | 0.000876296 |
| Carica papaya | supercontig_13 | 5 | CH_cpa_581 | 2 | 2 | 0.000570396 |
| Carica papaya | supercontig_171 | 5 | CH_cpa_582 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2370 | 5 | CH_cqu_867 | 3 | 22 | 0.000289808 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_315 | 3 | 3 | 0.0000017642 |
| Cucumis sativus L. | chr2 | 5 | CH_csa_498 | 2 | 2 | 0.000834759 |
| Davidia involucrata | GWHABJS00000014 | 5 | CH_din_463 | 2 | 2 | 0.0000500125 |
| Durio zibethinus | NW_019167860.1 | 5 | CH_dzi_117 | 4 | 4 | 0.000000000710961 |
| Durio zibethinus | NW_019168470.1 | 5 | CH_dzi_274 | 3 | 3 | 0.00000219123 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_497 | 4 | 4 | 0.000000000297744 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_805 | 5 | 69 | 0.000000773476 |
| Erythranthe guttata | scaffold_6 | 5 | CH_egut_318 | 3 | 3 | 0.000000445382 |
| Erythranthe guttata | scaffold_11 | 5 | CH_egut_319 | 3 | 3 | 0.000000445382 |
| Eutrema salsugineum | scaffold_14 | 5 | CH_esa_213 | 3 | 3 | 0.00000143526 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_550 | 2 | 2 | 0.0000589102 |
| Gossypium hirsutum | A07 | 5 | CH_ghi_226 | 5 | 5 | 0.00000000000219524 |
| Gossypium hirsutum | D07 | 5 | CH_ghi_227 | 5 | 5 | 0.00000000000219524 |
| Gossypium hirsutum | A05 | 5 | CH_ghi_793 | 3 | 4 | 0.0000390811 |
| Gossypium hirsutum | A09 | 5 | CH_ghi_794 | 3 | 4 | 0.0000390811 |
| Glycine max | Gm16 | 5 | CH_gma_105 | 5 | 5 | 0.000000000000661681 |
| Glycine max | Gm19 | 5 | CH_gma_120 | 5 | 6 | 0.00000000000396882 |
| Gossypium raimondii | Chr01 | 5 | CH_gra_193 | 4 | 4 | 0.00000000179182 |
| Gossypium raimondii | Chr12 | 5 | CH_gra_380 | 3 | 4 | 0.0000167047 |
| Hydrangea macrophylla | Hma1.2p1_0525F.1 | 5 | CH_hma_163 | 3 | 3 | 0.000000370226 |
| Lupinus albus | Lalb_Chr00c01 | 5 | CH_lal_304 | 3 | 4 | 0.00000363517 |
| Lotus japonicus | chr1 | 5 | CH_lja_84 | 4 | 4 | 0.000000000230381 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_450 | 3 | 4 | 0.000001902 |
| Magnolia biondii | Chr11 | 5 | CH_mbi_375 | 3 | 4 | 0.0000000566069 |
| Malus domestica | Chr09 | 5 | CH_mdo_224 | 4 | 4 | 0.0000000000809834 |
| Malus domestica | Chr17 | 5 | CH_mdo_616 | 3 | 4 | 0.00000189794 |
| Manihot esculenta | Chromosome15 | 5 | CH_mes_192 | 4 | 4 | 0.00000000022543 |
| Medicago truncatula | chr7 | 5 | CH_mtr_335 | 5 | 20 | 0.000000000152822 |
| Nelumbo nucifera | chr3 | 5 | CH_nnu_211 | 3 | 3 | 0.000000194901 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_212 | 3 | 3 | 0.000000194901 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_394 | 3 | 5 | 0.00000920062 |
| Petunia axillaris | Peaxi162Scf00420 | 5 | CH_pax_251 | 3 | 3 | 0.000000623712 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_226 | 3 | 3 | 0.000000168917 |
| Prunus persica | Pp03 | 5 | CH_ppe_200 | 4 | 4 | 0.0000000000871804 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_140 | 5 | 7 | 0.0000000000000102248 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_573 | 3 | 5 | 0.000000913512 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_123 | 5 | 5 | 0.000000000000251424 |
| Populus trichocarpa | Chr01 | 5 | CH_ptr_415 | 3 | 3 | 0.0000022802 |
| Phaseolus vulgaris | Chr01 | 5 | CH_pvu_87 | 5 | 5 | 0.0000000000000550885 |
| Quercus lobata | CM012294 | 5 | CH_qlo_459 | 4 | 4 | 0.0000000000144511 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_294 | 4 | 4 | 0.0000000000133054 |
| Striga asiatica | scaffold47 | 5 | CH_sas_175 | 2 | 2 | 0.000187611 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_245 | 5 | 50 | 0.00000000854308 |
| Simmondsia chinensis | GWHAASQ00000003 | 5 | CH_sci_83 | 4 | 6 | 0.0000000019438 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_2620 | 2 | 4 | 0.000876801 |
| Sapria himalayana | scaffold6_19132642 | 5 | CH_shi_303 | 2 | 2 | 0.0000571804 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_799 | 2 | 2 | 0.00044479 |
| Trochodendron aralioides | group13 | 5 | CH_tar_890 | 2 | 2 | 0.000600366 |
| Trochodendron aralioides | group12 | 5 | CH_tar_891 | 2 | 2 | 0.000600366 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_214 | 4 | 6 | 0.00000000123721 |
| Tarenaya hassleriana | NW_010961290.1 | 5 | CH_tha_136 | 3 | 3 | 0.0000012075 |
| Tripterygium wilfordii | NC_052254.1 | 5 | CH_twi_213 | 3 | 3 | 0.000000769286 |
| Vanilla planifolia | CM028163.1 | 5 | CH_vpl_102 | 4 | 12 | 0.00000000897953 |
| Vitis vinifera | chr14 | 5 | CH_vvi_137 | 4 | 4 | 0.00000000000660178 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_246 | 3 | 3 | 0.000000352118 |
| Brassica carinata | ChrC03 | 6 | CH_bca_1025 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrC02 | 6 | CH_bca_1026 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1027 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1028 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrB02 | 6 | CH_bca_1029 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrB07 | 6 | CH_bca_1030 | 3 | 3 | 0.00000845895 |
| Brassica carinata | ChrB06 | 6 | CH_bca_1370 | 3 | 5 | 0.0000845335 |
| Brassica carinata | ChrC05 | 6 | CH_bca_429 | 4 | 5 | 0.0000000180764 |
| Brassica napus | A04 | 6 | CH_bna_704 | 3 | 3 | 0.00000369001 |
| Brassica napus | C04 | 6 | CH_bna_705 | 3 | 3 | 0.00000369001 |
| Brassica oleracea | C4 | 6 | CH_bol_343 | 3 | 3 | 0.00000130772 |
| Brassica rapa | A04 | 6 | CH_bra_256 | 3 | 3 | 0.00000367707 |
| Camellia sinensis var. sinensis | Chr5 | 6 | CH_camsi_533 | 3 | 3 | 0.000000176627 |
| Cannabis sativa | NC_044379.1 | 6 | CH_cansat_117 | 4 | 4 | 0.000000000178389 |
| Cannabis sativa | NC_044372.1 | 6 | CH_cansat_286 | 4 | 26 | 0.00000265577 |
| Capsicum annuum | PGAv.1.6.scaffold473 | 6 | CH_can_110 | 5 | 5 | 0.0000000000000880461 |
| Coffea canephora | chr7 | 6 | CH_ccan_150 | 3 | 10 | 0.0000000326478 |
| Coffea canephora | chr11 | 6 | CH_ccan_675 | 2 | 6 | 0.00063882 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_83 | 6 | 6 | 1.75579e-17 |
| Carpinus fangiana | Cfa03 | 6 | CH_cfa_175 | 3 | 3 | 0.00000000860393 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_322 | 3 | 3 | 0.000000860004 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_130 | 5 | 5 | 0.000000000000221662 |
| Carya illinoinensis | Chr04 | 6 | CH_cil_234 | 4 | 4 | 0.000000000715171 |
| Corchorus olitorius | AWUE01017164.1 | 6 | CH_col_226 | 2 | 2 | 0.000876296 |
| Carica papaya | supercontig_13 | 6 | CH_cpa_581 | 2 | 2 | 0.000570396 |
| Carica papaya | supercontig_171 | 6 | CH_cpa_582 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2370 | 6 | CH_cqu_867 | 3 | 22 | 0.000289808 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_315 | 3 | 3 | 0.0000017642 |
| Cucumis sativus L. | chr2 | 6 | CH_csa_498 | 2 | 2 | 0.000834759 |
| Davidia involucrata | GWHABJS00000014 | 6 | CH_din_463 | 2 | 2 | 0.0000500125 |
| Durio zibethinus | NW_019167860.1 | 6 | CH_dzi_117 | 4 | 4 | 0.000000000710961 |
| Durio zibethinus | NW_019168470.1 | 6 | CH_dzi_274 | 3 | 3 | 0.00000219123 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_497 | 4 | 4 | 0.000000000297744 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_805 | 5 | 69 | 0.000000773476 |
| Erythranthe guttata | scaffold_6 | 6 | CH_egut_318 | 3 | 3 | 0.000000445382 |
| Erythranthe guttata | scaffold_11 | 6 | CH_egut_319 | 3 | 3 | 0.000000445382 |
| Eutrema salsugineum | scaffold_14 | 6 | CH_esa_213 | 3 | 3 | 0.00000143526 |
| Fragaria x ananassa | Fvb6-3 | 6 | CH_fan_423 | 3 | 3 | 0.000000790914 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_424 | 3 | 3 | 0.000000790914 |
| Fragaria x ananassa | Fvb5-2 | 6 | CH_fan_526 | 3 | 4 | 0.00000316321 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_550 | 2 | 2 | 0.0000589102 |
| Gossypium hirsutum | A07 | 6 | CH_ghi_226 | 5 | 5 | 0.00000000000219524 |
| Gossypium hirsutum | D07 | 6 | CH_ghi_227 | 5 | 5 | 0.00000000000219524 |
| Gossypium hirsutum | A05 | 6 | CH_ghi_793 | 3 | 4 | 0.0000390811 |
| Gossypium hirsutum | A09 | 6 | CH_ghi_794 | 3 | 4 | 0.0000390811 |
| Glycine max | Gm16 | 6 | CH_gma_105 | 5 | 5 | 0.000000000000661681 |
| Glycine max | Gm19 | 6 | CH_gma_120 | 5 | 6 | 0.00000000000396882 |
| Gossypium raimondii | Chr01 | 6 | CH_gra_193 | 4 | 4 | 0.00000000179182 |
| Gossypium raimondii | Chr12 | 6 | CH_gra_380 | 3 | 4 | 0.0000167047 |
| Hydrangea macrophylla | Hma1.2p1_0525F.1 | 6 | CH_hma_163 | 3 | 3 | 0.000000370226 |
| Lupinus albus | Lalb_Chr00c01 | 6 | CH_lal_304 | 3 | 4 | 0.00000363517 |
| Lotus japonicus | chr1 | 6 | CH_lja_84 | 4 | 4 | 0.000000000230381 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_450 | 3 | 4 | 0.000001902 |
| Magnolia biondii | Chr11 | 6 | CH_mbi_375 | 3 | 4 | 0.0000000566069 |
| Malus domestica | Chr09 | 6 | CH_mdo_224 | 4 | 4 | 0.0000000000809834 |
| Malus domestica | Chr17 | 6 | CH_mdo_616 | 3 | 4 | 0.00000189794 |
| Manihot esculenta | Chromosome15 | 6 | CH_mes_192 | 4 | 4 | 0.00000000022543 |
| Medicago truncatula | chr7 | 6 | CH_mtr_335 | 5 | 20 | 0.000000000152822 |
| Nelumbo nucifera | chr3 | 6 | CH_nnu_211 | 3 | 3 | 0.000000194901 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_212 | 3 | 3 | 0.000000194901 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_394 | 3 | 5 | 0.00000920062 |
| Petunia axillaris | Peaxi162Scf00420 | 6 | CH_pax_251 | 3 | 3 | 0.000000623712 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_226 | 3 | 3 | 0.000000168917 |
| Prunus persica | Pp03 | 6 | CH_ppe_200 | 4 | 4 | 0.0000000000871804 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_140 | 5 | 7 | 0.0000000000000102248 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_573 | 3 | 5 | 0.000000913512 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_123 | 5 | 5 | 0.000000000000251424 |
| Populus trichocarpa | Chr01 | 6 | CH_ptr_415 | 3 | 3 | 0.0000022802 |
| Phaseolus vulgaris | Chr01 | 6 | CH_pvu_87 | 5 | 5 | 0.0000000000000550885 |
| Quercus lobata | CM012294 | 6 | CH_qlo_459 | 4 | 4 | 0.0000000000144511 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_294 | 4 | 4 | 0.0000000000133054 |
| Striga asiatica | scaffold47 | 6 | CH_sas_175 | 2 | 2 | 0.000187611 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_245 | 5 | 50 | 0.00000000854308 |
| Simmondsia chinensis | GWHAASQ00000003 | 6 | CH_sci_83 | 4 | 6 | 0.0000000019438 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_2620 | 2 | 4 | 0.000876801 |
| Sapria himalayana | scaffold6_19132642 | 6 | CH_shi_303 | 2 | 2 | 0.0000571804 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_799 | 2 | 2 | 0.00044479 |
| Trochodendron aralioides | group13 | 6 | CH_tar_890 | 2 | 2 | 0.000600366 |
| Trochodendron aralioides | group12 | 6 | CH_tar_891 | 2 | 2 | 0.000600366 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_214 | 4 | 6 | 0.00000000123721 |
| Tarenaya hassleriana | NW_010961290.1 | 6 | CH_tha_136 | 3 | 3 | 0.0000012075 |
| Tripterygium wilfordii | NC_052254.1 | 6 | CH_twi_213 | 3 | 3 | 0.000000769286 |
| Vanilla planifolia | CM028163.1 | 6 | CH_vpl_102 | 4 | 12 | 0.00000000897953 |
| Vitis vinifera | chr14 | 6 | CH_vvi_137 | 4 | 4 | 0.00000000000660178 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |