Functional clusters

Information

  • Type InterPro
  • Description Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 5 CH_aag_292 2 2 0.00024077
Acer truncatum chr10 5 CH_acertr_602 2 2 0.000070497
Corylus avellana 1 5 CH_cav_513 2 2 0.0000766695
Citrus clementina scaffold_5 5 CH_ccl_542 2 2 0.0000820311
Carya illinoinensis Chr06 5 CH_cil_650 2 3 0.000185943
Cucumis sativus L. chr5 5 CH_csa_384 2 3 0.000250417
Eucalyptus grandis Chr07 5 CH_egr_638 3 4 0.0000000205528
Fragaria vesca Fvb5 5 CH_fve_718 2 2 0.000353461
Lonicera japonica GWHAAZE00000005 5 CH_lonja_760 2 2 0.0000598874
Magnolia biondii Chr04 5 CH_mbi_757 2 2 0.0000485661
Prunus persica Pp01 5 CH_ppe_603 2 2 0.0000745962
Populus trichocarpa Chr17 5 CH_ptr_239 3 3 0.00000000501143
Rhododendron simsii chr10 5 CH_rsi_684 2 2 0.0000645307
Salix brachista GWHAAZH00000017 5 CH_sbr_468 2 2 0.000063014
Trochodendron aralioides group0 5 CH_tar_523 2 2 0.0000600366
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_465 2 2 0.0000929238
Anthoceros agrestis Sc2ySwM_344 6 CH_aag_292 2 2 0.00024077
Acer truncatum chr10 6 CH_acertr_602 2 2 0.000070497
Corylus avellana 1 6 CH_cav_513 2 2 0.0000766695
Citrus clementina scaffold_5 6 CH_ccl_542 2 2 0.0000820311
Carya illinoinensis Chr06 6 CH_cil_650 2 3 0.000185943
Cucumis sativus L. chr5 6 CH_csa_384 2 3 0.000250417
Eucalyptus grandis Chr07 6 CH_egr_638 3 4 0.0000000205528
Fragaria vesca Fvb5 6 CH_fve_718 2 2 0.000353461
Lonicera japonica GWHAAZE00000005 6 CH_lonja_760 2 2 0.0000598874
Magnolia biondii Chr04 6 CH_mbi_757 2 2 0.0000485661
Prunus persica Pp01 6 CH_ppe_603 2 2 0.0000745962
Populus trichocarpa Chr17 6 CH_ptr_239 3 3 0.00000000501143
Rhododendron simsii chr10 6 CH_rsi_684 2 2 0.0000645307
Salix brachista GWHAAZH00000017 6 CH_sbr_468 2 2 0.000063014
Trochodendron aralioides group0 6 CH_tar_523 2 2 0.0000600366
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_465 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001