Functional clusters

Information

  • Type InterPro
  • Description Nucleoporin Nup120/160

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 5 CH_acertr_770 2 2 0.000211491
Brassica carinata ChrC02 5 CH_bca_1671 2 2 0.000320646
Brassica oleracea C4 5 CH_bol_729 2 2 0.000326861
Capsicum annuum PGAv.1.6.scaffold1379 5 CH_can_575 2 2 0.0000826105
Ceratophyllum demersum 11 5 CH_cde_223 2 2 0.0000789796
Citrullus lanatus CG_Chr06 5 CH_cla_29 4 4 0.00000000000209468
Carica papaya supercontig_21 5 CH_cpa_55 4 8 0.000000000180416
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_201 4 23 0.0000000119925
Hydrangea macrophylla Hma1.2p1_0052F.1 5 CH_hma_99 3 3 0.0000000185113
Olea europaea chr3 5 CH_oeu_345 2 2 0.0000533789
Oryza sativa ssp. japonica chr02 5 CH_osa_741 2 6 0.0007921
Sequoiadendron giganteum chr5 5 CH_sgi_1102 3 4 0.000000142385
Sequoiadendron giganteum chr1 5 CH_sgi_2455 2 2 0.000487151
Sapria himalayana scaffold37_5694058 5 CH_shi_302 2 2 0.0000571804
Solanum lycopersicum SL4.0ch01 5 CH_sly_604 2 2 0.0000586941
Utricularia gibba unitig_22 5 CH_ugi_168 2 2 0.0000820479
Vigna mungo CM024071.1 5 CH_vmu_30 5 5 1.30754e-16
Acer truncatum chr12 6 CH_acertr_770 2 2 0.000211491
Brassica carinata ChrC02 6 CH_bca_1671 2 2 0.000320646
Brassica oleracea C4 6 CH_bol_729 2 2 0.000326861
Capsicum annuum PGAv.1.6.scaffold1379 6 CH_can_575 2 2 0.0000826105
Ceratophyllum demersum 11 6 CH_cde_223 2 2 0.0000789796
Citrullus lanatus CG_Chr06 6 CH_cla_29 4 4 0.00000000000209468
Carica papaya supercontig_21 6 CH_cpa_55 4 8 0.000000000180416
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_201 4 23 0.0000000119925
Hydrangea macrophylla Hma1.2p1_0052F.1 6 CH_hma_99 3 3 0.0000000185113
Olea europaea chr3 6 CH_oeu_345 2 2 0.0000533789
Oryza sativa ssp. japonica chr02 6 CH_osa_741 2 6 0.0007921
Sequoiadendron giganteum chr5 6 CH_sgi_1102 3 4 0.000000142385
Sequoiadendron giganteum chr1 6 CH_sgi_2455 2 2 0.000487151
Sapria himalayana scaffold37_5694058 6 CH_shi_302 2 2 0.0000571804
Solanum lycopersicum SL4.0ch01 6 CH_sly_604 2 2 0.0000586941
Utricularia gibba unitig_22 6 CH_ugi_168 2 2 0.0000820479
Vigna mungo CM024071.1 6 CH_vmu_30 5 5 1.30754e-16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001