Functional clusters
Information
- Type InterPro
- Description Mediator complex, subunit Med23
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_948 | 2 | 2 | 0.000089815 |
| Brassica carinata | ChrB07 | 5 | CH_bca_1949 | 2 | 3 | 0.000641272 |
| Corylus avellana | 9 | 5 | CH_cav_109 | 4 | 5 | 0.00000000000676071 |
| Carya illinoinensis | Chr05 | 5 | CH_cil_577 | 2 | 2 | 0.0000619828 |
| Carica papaya | supercontig_2 | 5 | CH_cpa_169 | 3 | 7 | 0.000000474404 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_1257 | 2 | 4 | 0.000351144 |
| Gossypium hirsutum | A03 | 5 | CH_ghi_868 | 2 | 2 | 0.0000801047 |
| Nicotiana tabacum | Nitab4.5_0000018 | 5 | CH_nta_213 | 2 | 2 | 0.000109727 |
| Petunia axillaris | Peaxi162Scf00376 | 5 | CH_pax_434 | 2 | 2 | 0.0000703556 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_426 | 2 | 2 | 0.0000750356 |
| Quercus lobata | 3 | 5 | CH_qlo_1265 | 2 | 2 | 0.0000516289 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_764 | 2 | 3 | 0.000193586 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_432 | 4 | 4 | 0.000000000000346852 |
| Sapria himalayana | scaffold6_19132642 | 5 | CH_shi_141 | 3 | 8 | 0.0000000980824 |
| Solanum lycopersicum | SL4.0ch05 | 5 | CH_sly_603 | 2 | 2 | 0.0000586941 |
| Selenicereus undatus | Scaffold_3410 | 5 | CH_sun_196 | 2 | 2 | 0.0000726639 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_464 | 2 | 2 | 0.0000929238 |
| Vigna mungo | CM024074.1 | 5 | CH_vmu_56 | 4 | 5 | 0.0000000000040467 |
| Vanilla planifolia | CM028162.1 | 5 | CH_vpl_97 | 3 | 3 | 0.00000000818945 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_948 | 2 | 2 | 0.000089815 |
| Brassica carinata | ChrB07 | 6 | CH_bca_1949 | 2 | 3 | 0.000641272 |
| Corylus avellana | 9 | 6 | CH_cav_109 | 4 | 5 | 0.00000000000676071 |
| Carya illinoinensis | Chr05 | 6 | CH_cil_577 | 2 | 2 | 0.0000619828 |
| Carica papaya | supercontig_2 | 6 | CH_cpa_169 | 3 | 7 | 0.000000474404 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_1257 | 2 | 4 | 0.000351144 |
| Gossypium hirsutum | A03 | 6 | CH_ghi_868 | 2 | 2 | 0.0000801047 |
| Nicotiana tabacum | Nitab4.5_0000018 | 6 | CH_nta_213 | 2 | 2 | 0.000109727 |
| Petunia axillaris | Peaxi162Scf00376 | 6 | CH_pax_434 | 2 | 2 | 0.0000703556 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_426 | 2 | 2 | 0.0000750356 |
| Quercus lobata | 3 | 6 | CH_qlo_1265 | 2 | 2 | 0.0000516289 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_764 | 2 | 3 | 0.000193586 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_432 | 4 | 4 | 0.000000000000346852 |
| Sapria himalayana | scaffold6_19132642 | 6 | CH_shi_141 | 3 | 8 | 0.0000000980824 |
| Solanum lycopersicum | SL4.0ch05 | 6 | CH_sly_603 | 2 | 2 | 0.0000586941 |
| Selenicereus undatus | Scaffold_3410 | 6 | CH_sun_196 | 2 | 2 | 0.0000726639 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_464 | 2 | 2 | 0.0000929238 |
| Vigna mungo | CM024074.1 | 6 | CH_vmu_56 | 4 | 5 | 0.0000000000040467 |
| Vanilla planifolia | CM028162.1 | 6 | CH_vpl_97 | 3 | 3 | 0.00000000818945 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |