Functional clusters

Information

  • Type InterPro
  • Description Mediator of RNA polymerase II transcription subunit 25, von Willebrand factor type A domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_846 2 4 0.000422952
Capsicum annuum PGAv.1.6.scaffold2 5 CH_can_704 2 2 0.000247831
Carya illinoinensis Chr16 5 CH_cil_649 2 3 0.000185943
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_636 2 2 0.000134617
Glycine max Gm01 5 CH_gma_813 2 2 0.000379557
Glycine max Gm02 5 CH_gma_814 2 2 0.000379557
Helianthus annuus HanXRQChr17 5 CH_han_913 2 2 0.000115929
Lotus japonicus chr2 5 CH_lja_536 2 2 0.000429046
Lonicera japonica GWHAAZE00000006 5 CH_lonja_305 4 10 0.000000000676419
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_698 2 2 0.000154202
Magnolia biondii Chr01 5 CH_mbi_755 2 2 0.0000485661
Malus domestica Chr16 5 CH_mdo_1209 2 5 0.00037919
Petunia axillaris Peaxi162Scf00004 5 CH_pax_134 3 3 0.00000000742514
Punica granatum NC_045128.1 5 CH_pgr_425 2 2 0.0000750356
Phaseolus vulgaris Chr04 5 CH_pvu_544 2 2 0.000220418
Sequoiadendron giganteum chr11 5 CH_sgi_1081 3 3 0.000000124594
Vigna mungo CM024077.1 5 CH_vmu_153 3 3 0.0000000626267
Acer truncatum chr11 6 CH_acertr_846 2 4 0.000422952
Capsicum annuum PGAv.1.6.scaffold2 6 CH_can_704 2 2 0.000247831
Carya illinoinensis Chr16 6 CH_cil_649 2 3 0.000185943
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_636 2 2 0.000134617
Glycine max Gm01 6 CH_gma_813 2 2 0.000379557
Glycine max Gm02 6 CH_gma_814 2 2 0.000379557
Helianthus annuus HanXRQChr17 6 CH_han_913 2 2 0.000115929
Lotus japonicus chr2 6 CH_lja_536 2 2 0.000429046
Lonicera japonica GWHAAZE00000006 6 CH_lonja_305 4 10 0.000000000676419
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_698 2 2 0.000154202
Magnolia biondii Chr01 6 CH_mbi_755 2 2 0.0000485661
Malus domestica Chr16 6 CH_mdo_1209 2 5 0.00037919
Petunia axillaris Peaxi162Scf00004 6 CH_pax_134 3 3 0.00000000742514
Punica granatum NC_045128.1 6 CH_pgr_425 2 2 0.0000750356
Phaseolus vulgaris Chr04 6 CH_pvu_544 2 2 0.000220418
Sequoiadendron giganteum chr11 6 CH_sgi_1081 3 3 0.000000124594
Vigna mungo CM024077.1 6 CH_vmu_153 3 3 0.0000000626267

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001