Functional clusters
Information
- Type InterPro
- Description Plant organelle RNA recognition domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Hydrangea macrophylla | Hma1.2p1_0085F.1 | 5 | CH_hma_499 | 3 | 10 | 0.000265916 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_449 | 4 | 8 | 0.000000174571 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_77 | 9 | 22 | 4.54832e-19 |
| Sechium edule | LG08 | 5 | CH_sed_374 | 3 | 7 | 0.00018141 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_658 | 3 | 7 | 0.000320395 |
| Utricularia gibba | unitig_747 | 5 | CH_ugi_90 | 3 | 3 | 0.00000824014 |
| Hydrangea macrophylla | Hma1.2p1_0085F.1 | 6 | CH_hma_499 | 3 | 10 | 0.000265916 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_449 | 4 | 8 | 0.000000174571 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_77 | 9 | 22 | 4.54832e-19 |
| Sechium edule | LG08 | 6 | CH_sed_374 | 3 | 7 | 0.00018141 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_658 | 3 | 7 | 0.000320395 |
| Utricularia gibba | unitig_747 | 6 | CH_ugi_90 | 3 | 3 | 0.00000824014 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |