Functional clusters

Information

  • Type InterPro
  • Description G-protein beta WD-40 repeat

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carpinus fangiana Cfa04 5 CH_cfa_620 3 3 0.000790537
Eucalyptus grandis Chr10 5 CH_egr_1371 4 11 0.000596321
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_250 6 9 0.00000000315642
Quercus lobata 5 5 CH_qlo_1344 4 7 0.0000891471
Sechium edule LG06 5 CH_sed_429 6 43 0.000408229
Solanum pennellii Spenn-ch12 5 CH_spe_777 3 3 0.000437549
Selenicereus undatus Scaffold_33678 5 CH_sun_303 3 3 0.000299547
Theobroma cacao Chromosome_6 5 CH_tca_716 4 10 0.000595245
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_746 3 3 0.000772509
Vitis vinifera chr18 5 CH_vvi_399 4 4 0.00000368928
Vitis vinifera chr10 5 CH_vvi_437 7 52 0.0000157171
Carpinus fangiana Cfa04 6 CH_cfa_620 3 3 0.000790537
Eucalyptus grandis Chr10 6 CH_egr_1371 4 11 0.000596321
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_250 6 9 0.00000000315642
Quercus lobata 5 6 CH_qlo_1344 4 7 0.0000891471
Sechium edule LG06 6 CH_sed_429 6 43 0.000408229
Solanum pennellii Spenn-ch12 6 CH_spe_777 3 3 0.000437549
Selenicereus undatus Scaffold_33678 6 CH_sun_303 3 3 0.000299547
Theobroma cacao Chromosome_6 6 CH_tca_716 4 10 0.000595245
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_746 3 3 0.000772509
Vitis vinifera chr18 6 CH_vvi_399 4 4 0.00000368928
Vitis vinifera chr10 6 CH_vvi_437 7 52 0.0000157171

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001