Functional clusters
Information
- Type InterPro
- Description Aminotransferase-like, plant mobile domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_160 | 4 | 6 | 0.000000246347 |
| Brassica carinata | ChrC08 | 5 | CH_bca_359 | 6 | 64 | 0.000000004412 |
| Brassica napus | C06 | 5 | CH_bna_169 | 7 | 69 | 0.0000000000115522 |
| Brassica napus | A06 | 5 | CH_bna_241 | 6 | 46 | 0.000000000417247 |
| Brassica oleracea | C6 | 5 | CH_bol_130 | 6 | 66 | 0.000000000605215 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_540 | 4 | 7 | 0.000963964 |
| Corchorus olitorius | AWUE01014255.1 | 5 | CH_col_44 | 4 | 4 | 0.000000000373999 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1373 | 5 | CH_cqu_47 | 9 | 15 | 6.29196e-20 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1534 | 5 | CH_cqu_882 | 3 | 5 | 0.000358493 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_1184 | 7 | 50 | 0.000694331 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_515 | 10 | 74 | 0.000000797929 |
| Magnolia biondii | Chr12 | 5 | CH_mbi_693 | 7 | 32 | 0.0000255907 |
| Nicotiana tabacum | Nitab4.5_0000397 | 5 | CH_nta_157 | 3 | 3 | 0.0000205897 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_11 | 8 | 10 | 1.91744e-22 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_22 | 18 | 59 | 2.13655e-36 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_164 | 6 | 9 | 0.000000000558181 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_160 | 4 | 6 | 0.000000246347 |
| Brassica carinata | ChrC08 | 6 | CH_bca_359 | 6 | 64 | 0.000000004412 |
| Brassica napus | C06 | 6 | CH_bna_169 | 7 | 69 | 0.0000000000115522 |
| Brassica napus | A06 | 6 | CH_bna_241 | 6 | 46 | 0.000000000417247 |
| Brassica oleracea | C6 | 6 | CH_bol_130 | 6 | 66 | 0.000000000605215 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_540 | 4 | 7 | 0.000963964 |
| Cucumis melo | chr00 | 6 | CH_cme_232 | 7 | 67 | 0.00000423281 |
| Corchorus olitorius | AWUE01014255.1 | 6 | CH_col_44 | 4 | 4 | 0.000000000373999 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1373 | 6 | CH_cqu_47 | 9 | 15 | 6.29196e-20 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1534 | 6 | CH_cqu_882 | 3 | 5 | 0.000358493 |
| Fragaria x ananassa | Fvb1-3 | 6 | CH_fan_1056 | 6 | 53 | 0.000483224 |
| Fragaria x ananassa | Fvb1-2 | 6 | CH_fan_260 | 9 | 69 | 0.0000000160859 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_1184 | 7 | 50 | 0.000694331 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_515 | 10 | 74 | 0.000000797929 |
| Magnolia biondii | Chr12 | 6 | CH_mbi_693 | 7 | 32 | 0.0000255907 |
| Nicotiana tabacum | Nitab4.5_0000397 | 6 | CH_nta_157 | 3 | 3 | 0.0000205897 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_11 | 8 | 10 | 1.91744e-22 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_22 | 18 | 59 | 2.13655e-36 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_164 | 6 | 9 | 0.000000000558181 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |