Functional clusters

Information

  • Type InterPro
  • Description B domain of TMEM189, localisation domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 5 CH_aar_318 2 3 0.000273685
Acer truncatum chr2 5 CH_acertr_488 3 29 0.0000272156
Aquilegia oxysepala CHR01 5 CH_aox_341 2 2 0.0000801989
Brassica carinata ChrC06 5 CH_bca_1907 2 2 0.00059854
Brassica carinata ChrB03 5 CH_bca_1908 2 2 0.00059854
Brassica carinata ChrC07 5 CH_bca_572 3 4 0.00000015353
Brassica napus A08 5 CH_bna_1509 2 2 0.000835275
Brassica napus C08 5 CH_bna_555 3 5 0.000000620097
Brassica oleracea C8 5 CH_bol_236 3 4 0.0000000641015
Brassica rapa A08 5 CH_bra_464 2 2 0.000257588
Corylus avellana 6 5 CH_cav_643 2 2 0.000230008
Chenopodium quinoa C_Quinoa_Scaffold_1529 5 CH_cqu_752 2 2 0.000142146
Erythranthe guttata scaffold_8 5 CH_egut_251 3 3 0.000000031813
Eutrema salsugineum scaffold_1 5 CH_esa_135 3 3 0.00000000869853
Fragaria vesca Fvb3 5 CH_fve_614 2 3 0.000176725
Lotus japonicus chr6 5 CH_lja_453 2 3 0.000214516
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_513 3 24 0.00000801708
Prunus persica Pp04 5 CH_ppe_602 2 2 0.0000745962
Quercus lobata 8 5 CH_qlo_621 4 16 0.00000000375519
Striga asiatica scaffold9 5 CH_sas_219 2 3 0.000562805
Simmondsia chinensis GWHAASQ00000003 5 CH_sci_98 3 3 0.0000000108744
Schrenkiella parvula ch7-4 5 CH_spa_79 3 3 0.00000000929892
Utricularia gibba unitig_26 5 CH_ugi_326 2 2 0.000492287
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_462 2 2 0.0000929238
Zea mays 10 5 CH_zma_424 2 4 0.000306772
Aethionema arabicum LG-5 6 CH_aar_318 2 3 0.000273685
Acer truncatum chr2 6 CH_acertr_488 3 29 0.0000272156
Aquilegia oxysepala CHR01 6 CH_aox_341 2 2 0.0000801989
Brassica carinata ChrC06 6 CH_bca_1907 2 2 0.00059854
Brassica carinata ChrB03 6 CH_bca_1908 2 2 0.00059854
Brassica carinata ChrC07 6 CH_bca_572 3 4 0.00000015353
Brassica napus A08 6 CH_bna_1509 2 2 0.000835275
Brassica napus C08 6 CH_bna_555 3 5 0.000000620097
Brassica oleracea C8 6 CH_bol_236 3 4 0.0000000641015
Brassica rapa A08 6 CH_bra_464 2 2 0.000257588
Corylus avellana 6 6 CH_cav_643 2 2 0.000230008
Chenopodium quinoa C_Quinoa_Scaffold_1529 6 CH_cqu_752 2 2 0.000142146
Erythranthe guttata scaffold_8 6 CH_egut_251 3 3 0.000000031813
Eutrema salsugineum scaffold_1 6 CH_esa_135 3 3 0.00000000869853
Fragaria x ananassa Fvb3-4 6 CH_fan_1107 2 3 0.000555093
Fragaria x ananassa Fvb3-2 6 CH_fan_899 2 2 0.000185036
Fragaria vesca Fvb3 6 CH_fve_614 2 3 0.000176725
Lotus japonicus chr6 6 CH_lja_453 2 3 0.000214516
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_513 3 24 0.00000801708
Prunus persica Pp04 6 CH_ppe_602 2 2 0.0000745962
Quercus lobata 8 6 CH_qlo_621 4 16 0.00000000375519
Striga asiatica scaffold9 6 CH_sas_219 2 3 0.000562805
Simmondsia chinensis GWHAASQ00000003 6 CH_sci_98 3 3 0.0000000108744
Schrenkiella parvula ch7-4 6 CH_spa_79 3 3 0.00000000929892
Utricularia gibba unitig_26 6 CH_ugi_326 2 2 0.000492287
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_462 2 2 0.0000929238
Zea mays 10 6 CH_zma_424 2 4 0.000306772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001