Functional clusters

Information

  • Type InterPro
  • Description Small nuclear RNA activating complex (SNAPc), subunit SNAP43

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group15 5 CH_ach_364 2 2 0.000162964
Camellia sinensis var. sinensis Chr6 5 CH_camsi_1215 2 2 0.000275128
Camellia sinensis var. sinensis Chr14 5 CH_camsi_1216 2 2 0.000275128
Cardamine hirsuta Chr5 5 CH_chi_499 2 2 0.0000691204
Lotus japonicus chr3 5 CH_lja_568 2 3 0.000643531
Nicotiana tabacum Nitab4.5_0000245 5 CH_nta_211 2 2 0.000109727
Populus trichocarpa Chr04 5 CH_ptr_725 2 3 0.000520176
Sapria himalayana scaffold31_7046607 5 CH_shi_295 2 2 0.0000571804
Actinidia chinensis Lachesis_group15 6 CH_ach_364 2 2 0.000162964
Camellia sinensis var. sinensis Chr6 6 CH_camsi_1215 2 2 0.000275128
Camellia sinensis var. sinensis Chr14 6 CH_camsi_1216 2 2 0.000275128
Cardamine hirsuta Chr5 6 CH_chi_499 2 2 0.0000691204
Lotus japonicus chr3 6 CH_lja_568 2 3 0.000643531
Nicotiana tabacum Nitab4.5_0000245 6 CH_nta_211 2 2 0.000109727
Populus trichocarpa Chr04 6 CH_ptr_725 2 3 0.000520176
Sapria himalayana scaffold31_7046607 6 CH_shi_295 2 2 0.0000571804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001