Functional clusters

Information

  • Type InterPro
  • Description Vesicle transport protein, Use1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 5 CH_bca_1514 2 3 0.000192384
Brassica napus C08 5 CH_bna_1081 2 2 0.00011137
Corylus avellana 3 5 CH_cav_204 3 4 0.0000000352693
Magnolia biondii Chr16 5 CH_mbi_1035 2 2 0.000291397
Malus domestica Chr16 5 CH_mdo_1105 2 2 0.000227527
Oryza sativa ssp. japonica chr08 5 CH_osa_355 3 9 0.00000351301
Phaseolus vulgaris Chr03 5 CH_pvu_291 3 9 0.000000680053
Sequoiadendron giganteum chr6 5 CH_sgi_1749 2 2 0.0000487151
Tarenaya hassleriana NW_010965122.1 5 CH_tha_227 2 3 0.000209534
Brassica carinata ChrC07 6 CH_bca_1514 2 3 0.000192384
Brassica napus C08 6 CH_bna_1081 2 2 0.00011137
Corylus avellana 3 6 CH_cav_204 3 4 0.0000000352693
Magnolia biondii Chr16 6 CH_mbi_1035 2 2 0.000291397
Malus domestica Chr16 6 CH_mdo_1105 2 2 0.000227527
Oryza sativa ssp. japonica chr08 6 CH_osa_355 3 9 0.00000351301
Phaseolus vulgaris Chr03 6 CH_pvu_291 3 9 0.000000680053
Sequoiadendron giganteum chr6 6 CH_sgi_1749 2 2 0.0000487151
Tarenaya hassleriana NW_010965122.1 6 CH_tha_227 2 3 0.000209534

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001