Functional clusters

Information

  • Type InterPro
  • Description Protein of unknown function DUF1997

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 5 CH_aly_610 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_1313 2 2 0.000838273
Arabidopsis thaliana Chr5 5 CH_ath_472 2 3 0.000171895
Brassica carinata ChrB01 5 CH_bca_2038 2 2 0.000769551
Brassica carinata ChrB06 5 CH_bca_462 4 23 0.0000000326632
Brassica napus A04 5 CH_bna_466 3 3 0.000000147807
Brassica napus C04 5 CH_bna_467 3 3 0.000000147807
Brassica oleracea C4 5 CH_bol_230 3 3 0.0000000560911
Brassica rapa A04 5 CH_bra_152 3 3 0.0000000967649
Cardamine hirsuta Chr8 5 CH_chi_335 3 6 0.00000143297
Capsella rubella scaffold_7 5 CH_cru_598 2 2 0.000438693
Eutrema salsugineum scaffold_14 5 CH_esa_461 2 2 0.000456899
Fragaria vesca Fvb6 5 CH_fve_717 2 2 0.000353461
Lonicera japonica GWHAAZE00000003 5 CH_lonja_424 5 49 0.0000000843358
Lonicera japonica GWHAAZE00000008 5 CH_lonja_626 4 33 0.00000865219
Magnolia biondii Chr11 5 CH_mbi_1089 2 3 0.000437077
Olea europaea chr18 5 CH_oeu_453 2 2 0.000160137
Quercus lobata CM012294 5 CH_qlo_743 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_653 3 6 0.00000047671
Rhododendron simsii chr10 5 CH_rsi_804 2 2 0.000193592
Sequoiadendron giganteum chr7 5 CH_sgi_2451 2 2 0.000487151
Schrenkiella parvula ch7-1 5 CH_spa_331 2 2 0.000472404
Solanum tuberosum ST4.03ch02 5 CH_stu_919 2 2 0.000768679
Solanum tuberosum ST4.03ch08 5 CH_stu_920 2 2 0.000768679
Arabidopsis lyrata scaffold_7 6 CH_aly_610 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_1313 2 2 0.000838273
Arabidopsis thaliana Chr5 6 CH_ath_472 2 3 0.000171895
Brassica carinata ChrB01 6 CH_bca_2038 2 2 0.000769551
Brassica carinata ChrB06 6 CH_bca_462 4 23 0.0000000326632
Brassica napus A04 6 CH_bna_466 3 3 0.000000147807
Brassica napus C04 6 CH_bna_467 3 3 0.000000147807
Brassica oleracea C4 6 CH_bol_230 3 3 0.0000000560911
Brassica rapa A04 6 CH_bra_152 3 3 0.0000000967649
Cardamine hirsuta Chr8 6 CH_chi_335 3 6 0.00000143297
Capsella rubella scaffold_7 6 CH_cru_598 2 2 0.000438693
Eutrema salsugineum scaffold_14 6 CH_esa_461 2 2 0.000456899
Fragaria vesca Fvb6 6 CH_fve_717 2 2 0.000353461
Lonicera japonica GWHAAZE00000003 6 CH_lonja_424 5 49 0.0000000843358
Lonicera japonica GWHAAZE00000008 6 CH_lonja_626 4 33 0.00000865219
Magnolia biondii Chr11 6 CH_mbi_1089 2 3 0.000437077
Olea europaea chr18 6 CH_oeu_453 2 2 0.000160137
Quercus lobata CM012294 6 CH_qlo_743 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_653 3 6 0.00000047671
Rhododendron simsii chr10 6 CH_rsi_804 2 2 0.000193592
Sequoiadendron giganteum chr7 6 CH_sgi_2451 2 2 0.000487151
Schrenkiella parvula ch7-1 6 CH_spa_331 2 2 0.000472404
Solanum tuberosum ST4.03ch02 6 CH_stu_919 2 2 0.000768679
Solanum tuberosum ST4.03ch08 6 CH_stu_920 2 2 0.000768679

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001