Functional clusters

Information

  • Type InterPro
  • Description Late embryogenesis abundant protein, LEA-18

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 5 CH_aly_539 2 2 0.000198013
Arabidopsis thaliana Chr2 5 CH_ath_499 2 3 0.000257837
Cardamine hirsuta Chr4 5 CH_chi_618 2 2 0.000207361
Capsella rubella scaffold_4 5 CH_cru_537 2 2 0.000219346
Eucalyptus grandis Chr08 5 CH_egr_1256 2 4 0.000351144
Eutrema salsugineum scaffold_15 5 CH_esa_414 2 2 0.00022845
Oryza sativa ssp. japonica chr09 5 CH_osa_625 2 4 0.000316857
Schrenkiella parvula ch4-1 5 CH_spa_292 2 2 0.000236202
Arabidopsis lyrata scaffold_4 6 CH_aly_539 2 2 0.000198013
Arabidopsis thaliana Chr2 6 CH_ath_499 2 3 0.000257837
Cardamine hirsuta Chr4 6 CH_chi_618 2 2 0.000207361
Capsella rubella scaffold_4 6 CH_cru_537 2 2 0.000219346
Eucalyptus grandis Chr08 6 CH_egr_1256 2 4 0.000351144
Eutrema salsugineum scaffold_15 6 CH_esa_414 2 2 0.00022845
Oryza sativa ssp. japonica chr09 6 CH_osa_625 2 4 0.000316857
Schrenkiella parvula ch4-1 6 CH_spa_292 2 2 0.000236202

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001