Functional clusters

Information

  • Type InterPro
  • Description Domain of unknown function DUF2040

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group24 5 CH_ach_361 2 2 0.000162964
Arabidopsis lyrata scaffold_4 5 CH_aly_538 2 2 0.000198013
Arabidopsis thaliana Chr2 5 CH_ath_425 2 2 0.0000859476
Cardamine hirsuta Chr4 5 CH_chi_498 2 2 0.0000691204
Capsella rubella scaffold_4 5 CH_cru_458 2 2 0.0000731154
Erythranthe guttata scaffold_4 5 CH_egut_364 3 14 0.00000289382
Petunia axillaris Peaxi162Scf00010 5 CH_pax_429 2 2 0.0000703556
Quercus lobata 7 5 CH_qlo_402 4 5 0.00000000000206439
Salix brachista GWHAAZH00000015 5 CH_sbr_400 4 78 0.0000159653
Actinidia chinensis Lachesis_group24 6 CH_ach_361 2 2 0.000162964
Arabidopsis lyrata scaffold_4 6 CH_aly_538 2 2 0.000198013
Arabidopsis thaliana Chr2 6 CH_ath_425 2 2 0.0000859476
Cardamine hirsuta Chr4 6 CH_chi_498 2 2 0.0000691204
Capsella rubella scaffold_4 6 CH_cru_458 2 2 0.0000731154
Erythranthe guttata scaffold_4 6 CH_egut_364 3 14 0.00000289382
Petunia axillaris Peaxi162Scf00010 6 CH_pax_429 2 2 0.0000703556
Quercus lobata 7 6 CH_qlo_402 4 5 0.00000000000206439
Salix brachista GWHAAZH00000015 6 CH_sbr_400 4 78 0.0000159653

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001