Functional clusters

Information

  • Type InterPro
  • Description Annexin repeat

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group0 5 CH_ach_9 7 7 3.4521e-19
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 5 CH_arhy_291 5 7 0.0000000000351841
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 5 CH_arhy_501 4 7 0.000000130526
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_746 3 3 0.00000804534
Brassica carinata ChrB08 5 CH_bca_289 4 5 0.000000000876813
Brassica napus C09 5 CH_bna_629 3 3 0.00000169306
Beta vulgaris Chr9_EL10_PGA_scaffold8 5 CH_bvu_254 3 3 0.00000294069
Capsicum annuum PGAv.1.6.scaffold134 5 CH_can_108 5 5 0.0000000000000440231
Corylus avellana 1 5 CH_cav_349 3 4 0.00000423146
Coffea canephora chr0 5 CH_ccan_138 4 34 0.0000000151062
Coffea canephora chr0 5 CH_ccan_85 5 79 0.000000000342853
Cucumis sativus L. chr5 5 CH_csa_75 6 15 0.000000000000420963
Davidia involucrata GWHABJS00000002 5 CH_din_354 3 3 0.00000363566
Eucalyptus grandis Chr06 5 CH_egr_428 6 23 0.0000000000124353
Erythranthe guttata scaffold_2 5 CH_egut_304 3 3 0.000000278364
Fragaria vesca Fvb7 5 CH_fve_399 3 4 0.00000116593
Gossypium hirsutum A05 5 CH_ghi_341 4 4 0.00000000135653
Glycine max Gm13 5 CH_gma_138 5 7 0.0000000000138864
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_186 5 9 0.0000000000766149
Malus domestica Chr07 5 CH_mdo_204 5 11 0.0000000000312651
Nelumbo nucifera chr2 5 CH_nnu_256 3 4 0.00000167033
Olea europaea chr3 5 CH_oeu_219 3 4 0.00000376041
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_197 7 38 0.0000000000000217413
Rhododendron simsii chr07 5 CH_rsi_134 6 7 0.00000000000000218116
Striga asiatica scaffold119 5 CH_sas_257 2 2 0.000938057
Simmondsia chinensis GWHAASQ00000010 5 CH_sci_174 3 3 0.000000913446
Sechium edule LG04 5 CH_sed_214 3 3 0.00000167965
Sequoiadendron giganteum chr2 5 CH_sgi_1261 3 4 0.00000079731
Solanum lycopersicum SL4.0ch01 5 CH_sly_203 4 5 0.00000000100079
Selaginella moellendorffii scaffold_16 5 CH_smo_328 2 2 0.000560224
Solanum pennellii Spenn-ch01 5 CH_spe_132 4 4 0.000000000130684
Trochodendron aralioides group7 5 CH_tar_248 4 7 0.0000000879736
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_5 11 13 2.4545e-29
Vitis vinifera chrUn 5 CH_vvi_17 13 18 2.43176e-34
Vitis vinifera chr13_random 5 CH_vvi_556 3 5 0.000133497
Actinidia chinensis Lachesis_group0 6 CH_ach_9 7 7 3.4521e-19
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 6 CH_arhy_291 5 7 0.0000000000351841
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 6 CH_arhy_501 4 7 0.000000130526
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_746 3 3 0.00000804534
Brassica carinata ChrB08 6 CH_bca_289 4 5 0.000000000876813
Brassica napus C09 6 CH_bna_629 3 3 0.00000169306
Beta vulgaris Chr9_EL10_PGA_scaffold8 6 CH_bvu_254 3 3 0.00000294069
Capsicum annuum PGAv.1.6.scaffold134 6 CH_can_108 5 5 0.0000000000000440231
Corylus avellana 1 6 CH_cav_349 3 4 0.00000423146
Coffea canephora chr0 6 CH_ccan_138 4 34 0.0000000151062
Coffea canephora chr0 6 CH_ccan_85 5 79 0.000000000342853
Cucumis sativus L. chr5 6 CH_csa_75 6 15 0.000000000000420963
Davidia involucrata GWHABJS00000002 6 CH_din_354 3 3 0.00000363566
Eucalyptus grandis Chr06 6 CH_egr_428 6 23 0.0000000000124353
Erythranthe guttata scaffold_2 6 CH_egut_304 3 3 0.000000278364
Fragaria vesca Fvb7 6 CH_fve_399 3 4 0.00000116593
Gossypium hirsutum A05 6 CH_ghi_341 4 4 0.00000000135653
Glycine max Gm13 6 CH_gma_138 5 7 0.0000000000138864
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_186 5 9 0.0000000000766149
Malus domestica Chr07 6 CH_mdo_204 5 11 0.0000000000312651
Nelumbo nucifera chr2 6 CH_nnu_256 3 4 0.00000167033
Olea europaea chr3 6 CH_oeu_219 3 4 0.00000376041
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_197 7 38 0.0000000000000217413
Rhododendron simsii chr07 6 CH_rsi_134 6 7 0.00000000000000218116
Striga asiatica scaffold119 6 CH_sas_257 2 2 0.000938057
Simmondsia chinensis GWHAASQ00000010 6 CH_sci_174 3 3 0.000000913446
Sechium edule LG04 6 CH_sed_214 3 3 0.00000167965
Sequoiadendron giganteum chr2 6 CH_sgi_1261 3 4 0.00000079731
Solanum lycopersicum SL4.0ch01 6 CH_sly_203 4 5 0.00000000100079
Selaginella moellendorffii scaffold_16 6 CH_smo_328 2 2 0.000560224
Solanum pennellii Spenn-ch01 6 CH_spe_132 4 4 0.000000000130684
Trochodendron aralioides group7 6 CH_tar_248 4 7 0.0000000879736
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_5 11 13 2.4545e-29
Vitis vinifera chrUn 6 CH_vvi_17 13 18 2.43176e-34
Vitis vinifera chr13_random 6 CH_vvi_556 3 5 0.000133497

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001