Functional clusters
Information
- Type InterPro
- Description Cation/H+ exchanger, CPA1 family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cicer arietinum L. | Ca_LG4_v3 | 5 | CH_car_111 | 3 | 3 | 0.0000014993 |
| Corylus avellana | 9 | 5 | CH_cav_282 | 3 | 3 | 0.000000740683 |
| Coffea canephora | chr11 | 5 | CH_ccan_322 | 3 | 33 | 0.0000175011 |
| Carpinus fangiana | Cfa08 | 5 | CH_cfa_379 | 3 | 8 | 0.0000404307 |
| Carya illinoinensis | Chr05 | 5 | CH_cil_433 | 3 | 3 | 0.00000209773 |
| Carya illinoinensis | Chr08 | 5 | CH_cil_774 | 4 | 66 | 0.000506594 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_280 | 3 | 3 | 0.00000174505 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_123 | 5 | 6 | 0.000000000000584426 |
| Helianthus annuus | HanXRQChr14 | 5 | CH_han_628 | 3 | 4 | 0.00000407592 |
| Lupinus albus | Lalb_Chr20 | 5 | CH_lal_285 | 3 | 3 | 0.00000231376 |
| Lupinus albus | Lalb_Chr18 | 5 | CH_lal_286 | 3 | 3 | 0.00000231376 |
| Lupinus albus | Lalb_Chr20 | 5 | CH_lal_339 | 3 | 4 | 0.00000925243 |
| Malus domestica | Chr16 | 5 | CH_mdo_589 | 3 | 3 | 0.00000120796 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_330 | 3 | 5 | 0.00000489638 |
| Quercus lobata | 3 | 5 | CH_qlo_1099 | 3 | 5 | 0.0000114305 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1228 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_657 | 4 | 4 | 0.000000000114461 |
| Sapria himalayana | scaffold26_7557582 | 5 | CH_shi_168 | 4 | 18 | 0.000000215836 |
| Sapria himalayana | scaffold6_19132642 | 5 | CH_shi_200 | 3 | 4 | 0.00000164767 |
| Trochodendron aralioides | group16 | 5 | CH_tar_356 | 3 | 3 | 0.00000154633 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_828 | 3 | 15 | 0.000968647 |
| Zea mays | 7 | 5 | CH_zma_235 | 3 | 3 | 0.00000266676 |
| Cicer arietinum L. | Ca_LG4_v3 | 6 | CH_car_111 | 3 | 3 | 0.0000014993 |
| Corylus avellana | 9 | 6 | CH_cav_282 | 3 | 3 | 0.000000740683 |
| Coffea canephora | chr11 | 6 | CH_ccan_322 | 3 | 33 | 0.0000175011 |
| Carpinus fangiana | Cfa08 | 6 | CH_cfa_379 | 3 | 8 | 0.0000404307 |
| Carya illinoinensis | Chr05 | 6 | CH_cil_433 | 3 | 3 | 0.00000209773 |
| Carya illinoinensis | Chr08 | 6 | CH_cil_774 | 4 | 66 | 0.000506594 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_280 | 3 | 3 | 0.00000174505 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_123 | 5 | 6 | 0.000000000000584426 |
| Helianthus annuus | HanXRQChr14 | 6 | CH_han_628 | 3 | 4 | 0.00000407592 |
| Lupinus albus | Lalb_Chr20 | 6 | CH_lal_285 | 3 | 3 | 0.00000231376 |
| Lupinus albus | Lalb_Chr18 | 6 | CH_lal_286 | 3 | 3 | 0.00000231376 |
| Lupinus albus | Lalb_Chr20 | 6 | CH_lal_339 | 3 | 4 | 0.00000925243 |
| Malus domestica | Chr16 | 6 | CH_mdo_589 | 3 | 3 | 0.00000120796 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_330 | 3 | 5 | 0.00000489638 |
| Quercus lobata | 3 | 6 | CH_qlo_1099 | 3 | 5 | 0.0000114305 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1228 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_657 | 4 | 4 | 0.000000000114461 |
| Sapria himalayana | scaffold26_7557582 | 6 | CH_shi_168 | 4 | 18 | 0.000000215836 |
| Sapria himalayana | scaffold6_19132642 | 6 | CH_shi_200 | 3 | 4 | 0.00000164767 |
| Trochodendron aralioides | group16 | 6 | CH_tar_356 | 3 | 3 | 0.00000154633 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_828 | 3 | 15 | 0.000968647 |
| Zea mays | 7 | 6 | CH_zma_235 | 3 | 3 | 0.00000266676 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |