Functional clusters

Information

  • Type InterPro
  • Description Sugar transporter SWEET1a

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102833_HRSCAF_103052 5 CH_ama_153 2 2 0.000258665
Corylus avellana 7 5 CH_cav_481 2 2 0.0000766695
Carya illinoinensis Chr04 5 CH_cil_320 3 4 0.0000000922028
Daucus carota DCARv2_Chr1 5 CH_dca_590 2 2 0.000382665
Erythranthe guttata scaffold_3 5 CH_egut_483 2 2 0.0000728147
Fragaria vesca Fvb2 5 CH_fve_623 2 2 0.00017673
Lotus japonicus chr1 5 CH_lja_461 2 2 0.000214523
Malus domestica Chr05 5 CH_mdo_1077 2 2 0.000227527
Nelumbo nucifera chr1 5 CH_nnu_429 2 3 0.000144502
Olea europaea chr14 5 CH_oeu_402 2 3 0.000160132
Punica granatum NC_045134.1 5 CH_pgr_156 4 11 0.00000000209051
Populus trichocarpa Chr02 5 CH_ptr_237 3 3 0.00000000501143
Quercus lobata 9 5 CH_qlo_767 3 6 0.0000000799621
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1080 2 3 0.000119593
Rhododendron simsii chr10 5 CH_rsi_773 2 2 0.000193592
Striga asiatica scaffold24 5 CH_sas_228 2 2 0.000625371
Salvia bowleyana GWHASIU00000005 5 CH_sbo_547 2 3 0.000136491
Sequoiadendron giganteum chr3 5 CH_sgi_2512 3 32 0.000616243
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_302 3 8 0.00000290026
Avicennia marina ScioBoG_102833_HRSCAF_103052 6 CH_ama_153 2 2 0.000258665
Corylus avellana 7 6 CH_cav_481 2 2 0.0000766695
Carya illinoinensis Chr04 6 CH_cil_320 3 4 0.0000000922028
Daucus carota DCARv2_Chr1 6 CH_dca_590 2 2 0.000382665
Erythranthe guttata scaffold_3 6 CH_egut_483 2 2 0.0000728147
Fragaria x ananassa Fvb2-2 6 CH_fan_1064 2 2 0.000518101
Fragaria vesca Fvb2 6 CH_fve_623 2 2 0.00017673
Lotus japonicus chr1 6 CH_lja_461 2 2 0.000214523
Malus domestica Chr05 6 CH_mdo_1077 2 2 0.000227527
Nelumbo nucifera chr1 6 CH_nnu_429 2 3 0.000144502
Olea europaea chr14 6 CH_oeu_402 2 3 0.000160132
Punica granatum NC_045134.1 6 CH_pgr_156 4 11 0.00000000209051
Populus trichocarpa Chr02 6 CH_ptr_237 3 3 0.00000000501143
Quercus lobata 9 6 CH_qlo_767 3 6 0.0000000799621
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1080 2 3 0.000119593
Rhododendron simsii chr10 6 CH_rsi_773 2 2 0.000193592
Striga asiatica scaffold24 6 CH_sas_228 2 2 0.000625371
Salvia bowleyana GWHASIU00000005 6 CH_sbo_547 2 3 0.000136491
Sequoiadendron giganteum chr3 6 CH_sgi_2512 3 32 0.000616243
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_302 3 8 0.00000290026

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001