Functional clusters

Information

  • Type InterPro
  • Description Alanyl-tRNA synthetase, class IIc, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr2 5 CH_ccan_411 2 19 0.0000638836
Coffea canephora chr11 5 CH_ccan_723 2 8 0.000958224
Gossypium hirsutum D12 5 CH_ghi_1346 2 2 0.000961256
Glycine max Gm12 5 CH_gma_878 2 2 0.000569336
Sequoiadendron giganteum chr1 5 CH_sgi_2632 2 3 0.000876823
Sapria himalayana scaffold50_4036370 5 CH_shi_394 2 3 0.000171536
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_203 3 3 0.000000129529
Coffea canephora chr2 6 CH_ccan_411 2 19 0.0000638836
Coffea canephora chr11 6 CH_ccan_723 2 8 0.000958224
Gossypium hirsutum D12 6 CH_ghi_1346 2 2 0.000961256
Glycine max Gm12 6 CH_gma_878 2 2 0.000569336
Sequoiadendron giganteum chr1 6 CH_sgi_2632 2 3 0.000876823
Sapria himalayana scaffold50_4036370 6 CH_shi_394 2 3 0.000171536
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_203 3 3 0.000000129529

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001