Functional clusters
Information
- Type InterPro
- Description Seven-in-absentia protein, TRAF-like domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_74 | 5 | 7 | 0.000000000000656418 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1231 | 3 | 4 | 0.0000444411 |
| Brassica napus | A02 | 5 | CH_bna_422 | 5 | 22 | 0.0000000668488 |
| Capsicum annuum | PGAv.1.6.scaffold140 | 5 | CH_can_752 | 3 | 14 | 0.000445891 |
| Gossypium hirsutum | A13 | 5 | CH_ghi_995 | 3 | 8 | 0.000218541 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_113 | 6 | 22 | 0.00000000000344025 |
| Vitis vinifera | chr15 | 5 | CH_vvi_182 | 4 | 4 | 0.000000000653576 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_74 | 5 | 7 | 0.000000000000656418 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1231 | 3 | 4 | 0.0000444411 |
| Brassica napus | A02 | 6 | CH_bna_422 | 5 | 22 | 0.0000000668488 |
| Capsicum annuum | PGAv.1.6.scaffold140 | 6 | CH_can_752 | 3 | 14 | 0.000445891 |
| Gossypium hirsutum | A13 | 6 | CH_ghi_995 | 3 | 8 | 0.000218541 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_113 | 6 | 22 | 0.00000000000344025 |
| Vitis vinifera | chr15 | 6 | CH_vvi_182 | 4 | 4 | 0.000000000653576 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |