Functional clusters
Information
- Type InterPro
- Description Mitochondrial substrate/solute carrier
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR04 | 5 | CH_aox_453 | 3 | 3 | 0.000313653 |
| Brassica napus | C01 | 5 | CH_bna_527 | 5 | 9 | 0.000000446787 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_1140 | 4 | 9 | 0.00020836 |
| Chara braunii | BFEA01000374 | 5 | CH_cbr_150 | 4 | 10 | 0.0000415003 |
| Chara braunii | BFEA01000081 | 5 | CH_cbr_217 | 3 | 3 | 0.000125837 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_640 | 3 | 3 | 0.000395527 |
| Medicago truncatula | chr8 | 5 | CH_mtr_611 | 4 | 4 | 0.000000329102 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_285 | 5 | 6 | 0.0000000246515 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_296 | 5 | 5 | 0.00000000182002 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_138 | 9 | 31 | 0.000000000000289363 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1155 | 4 | 4 | 0.000000282471 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_2172 | 3 | 3 | 0.000178405 |
| Aquilegia oxysepala | CHR04 | 6 | CH_aox_453 | 3 | 3 | 0.000313653 |
| Brassica napus | C01 | 6 | CH_bna_527 | 5 | 9 | 0.000000446787 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_1140 | 4 | 9 | 0.00020836 |
| Chara braunii | BFEA01000374 | 6 | CH_cbr_150 | 4 | 10 | 0.0000415003 |
| Chara braunii | BFEA01000081 | 6 | CH_cbr_217 | 3 | 3 | 0.000125837 |
| Cucumis melo | chr04 | 6 | CH_cme_393 | 3 | 3 | 0.00027814 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_640 | 3 | 3 | 0.000395527 |
| Fragaria x ananassa | Fvb6-4 | 6 | CH_fan_848 | 4 | 7 | 0.000123056 |
| Medicago truncatula | chr8 | 6 | CH_mtr_611 | 4 | 4 | 0.000000329102 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_285 | 5 | 6 | 0.0000000246515 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_296 | 5 | 5 | 0.00000000182002 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_138 | 9 | 31 | 0.000000000000289363 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1155 | 4 | 4 | 0.000000282471 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_2172 | 3 | 3 | 0.000178405 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |