Functional clusters

Information

  • Type InterPro
  • Description Ubiquitin-activating enzyme E1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chara braunii BFEA01000242 5 CH_cbr_226 2 3 0.000215773
Corchorus olitorius AWUE01014642.1 5 CH_col_124 2 2 0.000292099
Carica papaya supercontig_2 5 CH_cpa_274 2 2 0.0000950661
Durio zibethinus NW_019167882.1 5 CH_dzi_528 2 2 0.000463489
Gossypium hirsutum D03 5 CH_ghi_1327 2 2 0.000961256
Gossypium hirsutum D13 5 CH_ghi_1328 2 2 0.000961256
Gossypium raimondii Chr13 5 CH_gra_610 2 2 0.000536107
Populus trichocarpa Chr09 5 CH_ptr_604 2 2 0.0001734
Phaseolus vulgaris Chr06 5 CH_pvu_219 3 3 0.0000000323906
Salix brachista GWHAAZH00000016 5 CH_sbr_584 2 2 0.000378084
Salix brachista GWHAAZH00000009 5 CH_sbr_585 2 2 0.000378084
Theobroma cacao Chromosome_9 5 CH_tca_514 2 2 0.0000732386
Chara braunii BFEA01000242 6 CH_cbr_226 2 3 0.000215773
Corchorus olitorius AWUE01014642.1 6 CH_col_124 2 2 0.000292099
Carica papaya supercontig_2 6 CH_cpa_274 2 2 0.0000950661
Durio zibethinus NW_019167882.1 6 CH_dzi_528 2 2 0.000463489
Gossypium hirsutum D03 6 CH_ghi_1327 2 2 0.000961256
Gossypium hirsutum D13 6 CH_ghi_1328 2 2 0.000961256
Gossypium raimondii Chr13 6 CH_gra_610 2 2 0.000536107
Populus trichocarpa Chr09 6 CH_ptr_604 2 2 0.0001734
Phaseolus vulgaris Chr06 6 CH_pvu_219 3 3 0.0000000323906
Salix brachista GWHAAZH00000016 6 CH_sbr_584 2 2 0.000378084
Salix brachista GWHAAZH00000009 6 CH_sbr_585 2 2 0.000378084
Theobroma cacao Chromosome_9 6 CH_tca_514 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001