Functional clusters

Information

  • Type InterPro
  • Description Retropepsins

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_1327 4 9 0.000883317
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 5 CH_arhy_716 5 10 0.00000560397
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 5 CH_arhy_738 4 4 0.00000710064
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_864 4 5 0.0000354125
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 5 CH_arhy_955 7 62 0.0000945808
Amborella trichopoda AmTr_v1.0_scaffold00071 5 CH_atr_619 2 5 0.000794313
Gossypium raimondii Chr03 5 CH_gra_614 2 3 0.000536107
Helianthus annuus HanXRQChr02 5 CH_han_884 2 3 0.000115926
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_1327 4 9 0.000883317
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 6 CH_arhy_716 5 10 0.00000560397
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 6 CH_arhy_738 4 4 0.00000710064
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_864 4 5 0.0000354125
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 6 CH_arhy_955 7 62 0.0000945808
Amborella trichopoda AmTr_v1.0_scaffold00071 6 CH_atr_619 2 5 0.000794313
Gossypium raimondii Chr03 6 CH_gra_614 2 3 0.000536107
Helianthus annuus HanXRQChr02 6 CH_han_884 2 3 0.000115926

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001