Functional clusters
Information
- Type InterPro
- Description Transcription factor TCP subgroup
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC01 | 5 | CH_bca_1535 | 4 | 20 | 0.000200452 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1848 | 3 | 5 | 0.000520813 |
| Carica papaya | supercontig_65 | 5 | CH_cpa_92 | 4 | 4 | 0.0000000124897 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_256 | 4 | 5 | 0.000000895172 |
| Daucus carota | DCARv2_Chr1 | 5 | CH_dca_4 | 14 | 17 | 1.95876e-33 |
| Helianthus annuus | HanXRQChr04 | 5 | CH_han_1199 | 3 | 7 | 0.000833821 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_392 | 4 | 5 | 0.000000070703 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1535 | 4 | 20 | 0.000200452 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1848 | 3 | 5 | 0.000520813 |
| Carica papaya | supercontig_65 | 6 | CH_cpa_92 | 4 | 4 | 0.0000000124897 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_256 | 4 | 5 | 0.000000895172 |
| Daucus carota | DCARv2_Chr1 | 6 | CH_dca_4 | 14 | 17 | 1.95876e-33 |
| Helianthus annuus | HanXRQChr04 | 6 | CH_han_1199 | 3 | 7 | 0.000833821 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_392 | 4 | 5 | 0.000000070703 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |