Functional clusters
Information
- Type InterPro
- Description Amidohydrolase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_117 | 5 | CH_aag_358 | 2 | 2 | 0.000802568 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 5 | CH_amhyb_445 | 2 | 2 | 0.000841751 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 5 | CH_arhy_205 | 5 | 5 | 0.0000000000000516285 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 5 | CH_arhy_206 | 5 | 5 | 0.0000000000000516285 |
| Amborella trichopoda | AmTr_v1.0_scaffold00018 | 5 | CH_atr_434 | 3 | 12 | 0.000116431 |
| Brassica carinata | ChrB02 | 5 | CH_bca_970 | 3 | 5 | 0.00000559168 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_250 | 5 | 14 | 0.0000000000525091 |
| Carya illinoinensis | Chr10 | 5 | CH_cil_245 | 4 | 5 | 0.00000000176787 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3100 | 5 | CH_cqu_304 | 4 | 12 | 0.0000000780903 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_655 | 4 | 9 | 0.0000000249864 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_260 | 4 | 6 | 0.0000000125517 |
| Glycine max | Gm08 | 5 | CH_gma_53 | 6 | 7 | 8.87267e-18 |
| Lotus japonicus | chr3 | 5 | CH_lja_221 | 3 | 3 | 0.000000429537 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_372 | 5 | 24 | 0.0000000122507 |
| Malus domestica | Chr14 | 5 | CH_mdo_41 | 7 | 7 | 7.4545e-21 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_280 | 3 | 3 | 0.000000234293 |
| Prunus persica | Pp07 | 5 | CH_ppe_215 | 4 | 4 | 0.000000000156925 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_140 | 4 | 5 | 0.00000000152208 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_196 | 5 | 39 | 0.0000000408751 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_600 | 3 | 3 | 0.00000170526 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1535 | 3 | 4 | 0.0000288087 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_63 | 12 | 16 | 4.22167e-33 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_836 | 4 | 4 | 0.00000000368565 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_513 | 5 | CH_tpr_43 | 5 | 5 | 0.0000000000000137934 |
| Anthoceros agrestis | Sc2ySwM_117 | 6 | CH_aag_358 | 2 | 2 | 0.000802568 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 6 | CH_amhyb_445 | 2 | 2 | 0.000841751 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 6 | CH_arhy_205 | 5 | 5 | 0.0000000000000516285 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 6 | CH_arhy_206 | 5 | 5 | 0.0000000000000516285 |
| Amborella trichopoda | AmTr_v1.0_scaffold00018 | 6 | CH_atr_434 | 3 | 12 | 0.000116431 |
| Brassica carinata | ChrB02 | 6 | CH_bca_970 | 3 | 5 | 0.00000559168 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_250 | 5 | 14 | 0.0000000000525091 |
| Carya illinoinensis | Chr10 | 6 | CH_cil_245 | 4 | 5 | 0.00000000176787 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3100 | 6 | CH_cqu_304 | 4 | 12 | 0.0000000780903 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_655 | 4 | 9 | 0.0000000249864 |
| Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_551 | 3 | 3 | 0.00000433256 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_670 | 3 | 4 | 0.0000173259 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_260 | 4 | 6 | 0.0000000125517 |
| Glycine max | Gm08 | 6 | CH_gma_53 | 6 | 7 | 8.87267e-18 |
| Lotus japonicus | chr3 | 6 | CH_lja_221 | 3 | 3 | 0.000000429537 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_372 | 5 | 24 | 0.0000000122507 |
| Malus domestica | Chr14 | 6 | CH_mdo_41 | 7 | 7 | 7.4545e-21 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_280 | 3 | 3 | 0.000000234293 |
| Prunus persica | Pp07 | 6 | CH_ppe_215 | 4 | 4 | 0.000000000156925 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_140 | 4 | 5 | 0.00000000152208 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_196 | 5 | 39 | 0.0000000408751 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_600 | 3 | 3 | 0.00000170526 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1535 | 3 | 4 | 0.0000288087 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_63 | 12 | 16 | 4.22167e-33 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_836 | 4 | 4 | 0.00000000368565 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_513 | 6 | CH_tpr_43 | 5 | 5 | 0.0000000000000137934 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |