Functional clusters

Information

  • Type InterPro
  • Description Vesicle-associated membrane-protein-associated protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_17730_HRSCAF_17811 5 CH_ama_83 3 3 0.00000624499
Citrullus lanatus CG_Chr03 5 CH_cla_171 3 5 0.0000194663
Carica papaya supercontig_49 5 CH_cpa_537 3 14 0.000413327
Cucumis sativus L. chr6 5 CH_csa_263 3 4 0.00000689682
Hydrangea macrophylla Hma1.2p1_0332F.1 5 CH_hma_651 2 2 0.000666519
Lotus japonicus chr2 5 CH_lja_266 3 3 0.00000168747
Salix brachista GWHAAZH00000001 5 CH_sbr_346 3 3 0.0000040503
Sequoiadendron giganteum chr4 5 CH_sgi_1199 3 3 0.00000042718
Solanum tuberosum ST4.03ch01 5 CH_stu_737 3 10 0.00017178
Tripterygium wilfordii NC_052239.1 5 CH_twi_429 3 8 0.000212687
Avicennia marina ScioBoG_17730_HRSCAF_17811 6 CH_ama_83 3 3 0.00000624499
Citrullus lanatus CG_Chr03 6 CH_cla_171 3 5 0.0000194663
Carica papaya supercontig_49 6 CH_cpa_537 3 14 0.000413327
Cucumis sativus L. chr6 6 CH_csa_263 3 4 0.00000689682
Hydrangea macrophylla Hma1.2p1_0332F.1 6 CH_hma_651 2 2 0.000666519
Lotus japonicus chr2 6 CH_lja_266 3 3 0.00000168747
Salix brachista GWHAAZH00000001 6 CH_sbr_346 3 3 0.0000040503
Sequoiadendron giganteum chr4 6 CH_sgi_1199 3 3 0.00000042718
Solanum tuberosum ST4.03ch01 6 CH_stu_737 3 10 0.00017178
Tripterygium wilfordii NC_052239.1 6 CH_twi_429 3 8 0.000212687

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001