Functional clusters
Information
- Type InterPro
- Description Legume lectin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 5 | CH_arhy_256 | 6 | 18 | 0.0000000000037718 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 5 | CH_arhy_34 | 12 | 19 | 6.20385e-33 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_238 | 3 | 5 | 0.000000246213 |
| Brassica napus | A06 | 5 | CH_bna_456 | 3 | 3 | 0.000000113698 |
| Brassica oleracea | C5 | 5 | CH_bol_781 | 2 | 2 | 0.000490292 |
| Brassica rapa | A06 | 5 | CH_bra_142 | 3 | 3 | 0.0000000552942 |
| Cicer arietinum L. | Ca_LG8_v3 | 5 | CH_car_410 | 2 | 2 | 0.000778301 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_715 | 2 | 2 | 0.000414723 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_247 | 3 | 3 | 0.000000160382 |
| Glycine max | Gm08 | 5 | CH_gma_217 | 4 | 5 | 0.00000000195178 |
| Glycine max | Gm09 | 5 | CH_gma_411 | 3 | 3 | 0.00000146948 |
| Lupinus albus | Lalb_Chr08 | 5 | CH_lal_698 | 2 | 2 | 0.000524824 |
| Lotus japonicus | chr2 | 5 | CH_lja_24 | 6 | 6 | 8.83736e-18 |
| Medicago truncatula | chr5 | 5 | CH_mtr_155 | 6 | 6 | 6.06625e-16 |
| Medicago truncatula | chr1 | 5 | CH_mtr_201 | 6 | 9 | 0.0000000000000508995 |
| Medicago truncatula | chr3 | 5 | CH_mtr_803 | 3 | 3 | 0.00000658367 |
| Pisum sativum | chr2LG1 | 5 | CH_psa_108 | 4 | 4 | 0.00000000014053 |
| Phaseolus vulgaris | Chr04 | 5 | CH_pvu_166 | 4 | 4 | 0.00000000162435 |
| Phaseolus vulgaris | Chr02 | 5 | CH_pvu_194 | 4 | 5 | 0.00000000811882 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_2 | 28 | 46 | 3.76266e-84 |
| Tarenaya hassleriana | NW_010965696.1 | 5 | CH_tha_257 | 2 | 2 | 0.000209541 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_482 | 5 | CH_tpr_109 | 4 | 4 | 0.000000000273295 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_264 | 3 | 3 | 0.00000103146 |
| Tripterygium wilfordii | NC_052248.1 | 5 | CH_twi_115 | 4 | 11 | 0.00000000163693 |
| Vigna mungo | CM024069.1 | 5 | CH_vmu_66 | 4 | 5 | 0.000000000020233 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 6 | CH_arhy_256 | 6 | 18 | 0.0000000000037718 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 6 | CH_arhy_34 | 12 | 19 | 6.20385e-33 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_238 | 3 | 5 | 0.000000246213 |
| Brassica napus | A06 | 6 | CH_bna_456 | 3 | 3 | 0.000000113698 |
| Brassica oleracea | C5 | 6 | CH_bol_781 | 2 | 2 | 0.000490292 |
| Brassica rapa | A06 | 6 | CH_bra_142 | 3 | 3 | 0.0000000552942 |
| Cicer arietinum L. | Ca_LG8_v3 | 6 | CH_car_410 | 2 | 2 | 0.000778301 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_715 | 2 | 2 | 0.000414723 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_247 | 3 | 3 | 0.000000160382 |
| Glycine max | Gm08 | 6 | CH_gma_217 | 4 | 5 | 0.00000000195178 |
| Glycine max | Gm09 | 6 | CH_gma_411 | 3 | 3 | 0.00000146948 |
| Lupinus albus | Lalb_Chr08 | 6 | CH_lal_698 | 2 | 2 | 0.000524824 |
| Lotus japonicus | chr2 | 6 | CH_lja_24 | 6 | 6 | 8.83736e-18 |
| Medicago truncatula | chr5 | 6 | CH_mtr_155 | 6 | 6 | 6.06625e-16 |
| Medicago truncatula | chr1 | 6 | CH_mtr_201 | 6 | 9 | 0.0000000000000508995 |
| Medicago truncatula | chr3 | 6 | CH_mtr_803 | 3 | 3 | 0.00000658367 |
| Pisum sativum | chr2LG1 | 6 | CH_psa_108 | 4 | 4 | 0.00000000014053 |
| Phaseolus vulgaris | Chr04 | 6 | CH_pvu_166 | 4 | 4 | 0.00000000162435 |
| Phaseolus vulgaris | Chr02 | 6 | CH_pvu_194 | 4 | 5 | 0.00000000811882 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_2 | 28 | 46 | 3.76266e-84 |
| Tarenaya hassleriana | NW_010965696.1 | 6 | CH_tha_257 | 2 | 2 | 0.000209541 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_482 | 6 | CH_tpr_109 | 4 | 4 | 0.000000000273295 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_264 | 3 | 3 | 0.00000103146 |
| Tripterygium wilfordii | NC_052248.1 | 6 | CH_twi_115 | 4 | 11 | 0.00000000163693 |
| Vigna mungo | CM024069.1 | 6 | CH_vmu_66 | 4 | 5 | 0.000000000020233 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |