Functional clusters

Information

  • Type InterPro
  • Description Citrate synthase-like, large alpha subdomain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group20 5 CH_ach_608 2 2 0.000814819
Arabidopsis lyrata scaffold_5 5 CH_aly_736 2 2 0.000990066
Arabidopsis thaliana Chr3 5 CH_ath_518 2 2 0.000286492
Amborella trichopoda AmTr_v1.0_scaffold00025 5 CH_atr_651 2 2 0.000794407
Brassica napus C08 5 CH_bna_547 3 3 0.000000589161
Brassica rapa A09 5 CH_bra_190 3 3 0.000000456177
Cardamine hirsuta Chr5 5 CH_chi_266 3 3 0.000000143334
Capsella rubella scaffold_5 5 CH_cru_650 2 2 0.000731154
Schrenkiella parvula ch5-1 5 CH_spa_114 3 3 0.000000185978
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_711 2 2 0.000557543
Actinidia chinensis Lachesis_group20 6 CH_ach_608 2 2 0.000814819
Arabidopsis lyrata scaffold_5 6 CH_aly_736 2 2 0.000990066
Arabidopsis thaliana Chr3 6 CH_ath_518 2 2 0.000286492
Amborella trichopoda AmTr_v1.0_scaffold00025 6 CH_atr_651 2 2 0.000794407
Brassica napus C08 6 CH_bna_547 3 3 0.000000589161
Brassica rapa A09 6 CH_bra_190 3 3 0.000000456177
Cardamine hirsuta Chr5 6 CH_chi_266 3 3 0.000000143334
Capsella rubella scaffold_5 6 CH_cru_650 2 2 0.000731154
Schrenkiella parvula ch5-1 6 CH_spa_114 3 3 0.000000185978
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_711 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001