Functional clusters
Information
- Type InterPro
- Description Ribosome-inactivating protein, subdomain 1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chenopodium quinoa | C_Quinoa_Scaffold_3626 | 5 | CH_cqu_606 | 3 | 7 | 0.0000259121 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_29 | 7 | 15 | 5.84572e-17 |
| Gossypium raimondii | Chr13 | 5 | CH_gra_554 | 2 | 4 | 0.000321647 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_71 | 8 | 47 | 0.00000000000000615133 |
| Striga asiatica | scaffold273 | 5 | CH_sas_27 | 5 | 11 | 0.00000000595325 |
| Striga asiatica | scaffold67 | 5 | CH_sas_55 | 4 | 7 | 0.00000038329 |
| Sechium edule | LG09 | 5 | CH_sed_20 | 7 | 7 | 3.4282e-21 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3626 | 6 | CH_cqu_606 | 3 | 7 | 0.0000259121 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_29 | 7 | 15 | 5.84572e-17 |
| Gossypium raimondii | Chr13 | 6 | CH_gra_554 | 2 | 4 | 0.000321647 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_71 | 8 | 47 | 0.00000000000000615133 |
| Striga asiatica | scaffold273 | 6 | CH_sas_27 | 5 | 11 | 0.00000000595325 |
| Striga asiatica | scaffold67 | 6 | CH_sas_55 | 4 | 7 | 0.00000038329 |
| Sechium edule | LG09 | 6 | CH_sed_20 | 7 | 7 | 3.4282e-21 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |