Functional clusters
Information
- Type InterPro
- Description Acyl-CoA desaturase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_241 | 3 | 4 | 0.0000227135 |
| Aethionema arabicum | LG-1 | 5 | CH_aar_27 | 8 | 9 | 9.60336e-22 |
| Actinidia chinensis | Lachesis_group27 | 5 | CH_ach_118 | 3 | 5 | 0.000000177036 |
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_151 | 5 | 33 | 0.00000000188619 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 5 | CH_amhyb_106 | 3 | 3 | 0.000000106286 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 5 | CH_amhyb_467 | 2 | 2 | 0.000841751 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_67 | 6 | 40 | 0.000000000000139945 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1222 | 3 | 5 | 0.0000409952 |
| Brassica carinata | ChrC05 | 5 | CH_bca_130 | 7 | 38 | 0.000000000000471505 |
| Brassica carinata | ChrC07 | 5 | CH_bca_478 | 4 | 7 | 0.0000000475285 |
| Brassica carinata | ChrB02 | 5 | CH_bca_646 | 5 | 42 | 0.000000367038 |
| Brassica carinata | ChrC07 | 5 | CH_bca_941 | 3 | 3 | 0.00000410164 |
| Brassica napus | C05 | 5 | CH_bna_1039 | 3 | 5 | 0.000078403 |
| Brassica napus | A10 | 5 | CH_bna_1171 | 4 | 37 | 0.000204598 |
| Brassica napus | A09 | 5 | CH_bna_311 | 4 | 4 | 0.00000000313086 |
| Brassica napus | C08 | 5 | CH_bna_355 | 5 | 18 | 0.0000000104123 |
| Brassica napus | A03 | 5 | CH_bna_366 | 4 | 6 | 0.0000000156493 |
| Brassica napus | C05 | 5 | CH_bna_484 | 5 | 31 | 0.000000205611 |
| Brassica napus | A05 | 5 | CH_bna_926 | 3 | 4 | 0.0000313709 |
| Brassica napus | C08 | 5 | CH_bna_927 | 3 | 4 | 0.0000313709 |
| Brassica oleracea | C8 | 5 | CH_bol_158 | 5 | 20 | 0.00000000348261 |
| Brassica oleracea | C8 | 5 | CH_bol_439 | 3 | 4 | 0.00000986957 |
| Brassica oleracea | C5 | 5 | CH_bol_474 | 4 | 29 | 0.0000180883 |
| Brassica oleracea | C3 | 5 | CH_bol_497 | 3 | 5 | 0.0000246678 |
| Brassica rapa | A03 | 5 | CH_bra_119 | 4 | 5 | 0.00000000710184 |
| Brassica rapa | A09 | 5 | CH_bra_297 | 3 | 4 | 0.0000147037 |
| Brassica rapa | A05 | 5 | CH_bra_362 | 3 | 6 | 0.0000734727 |
| Brassica rapa | A10 | 5 | CH_bra_375 | 4 | 38 | 0.000103765 |
| Camellia sinensis var. sinensis | Chr15 | 5 | CH_camsi_1183 | 2 | 4 | 0.000275116 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_403 | 2 | 2 | 0.0000656642 |
| Citrullus lanatus | CG_Chr07 | 5 | CH_cla_4 | 9 | 11 | 1.45455e-23 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 5 | CH_cqu_846 | 2 | 2 | 0.000284293 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3333 | 5 | CH_cqu_847 | 2 | 2 | 0.000284293 |
| Chlamydomonas reinhardtii | chromosome_4 | 5 | CH_cre_130 | 3 | 22 | 0.000119303 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_262 | 3 | 3 | 0.000000280668 |
| Cucumis sativus L. | chr1 | 5 | CH_csa_236 | 3 | 3 | 0.00000229961 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_28 | 7 | 7 | 2.11162e-20 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_311 | 3 | 3 | 0.000000498357 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_115 | 5 | 27 | 0.00000000113707 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_224 | 5 | 22 | 0.00000000305019 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_138 | 6 | 9 | 0.0000000000000374625 |
| Helianthus annuus | HanXRQChr04 | 5 | CH_han_570 | 4 | 13 | 0.00000184458 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_594 | 4 | 14 | 0.00000258148 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_1193 | 3 | 20 | 0.000733634 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_192 | 6 | 20 | 0.00000000000014086 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_202 | 5 | 12 | 0.000000000256106 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_396 | 4 | 12 | 0.000000478878 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_524 | 3 | 4 | 0.0000107766 |
| Malus domestica | Chr09 | 5 | CH_mdo_554 | 3 | 3 | 0.00000061692 |
| Olea europaea | chr12 | 5 | CH_oeu_408 | 2 | 3 | 0.000160132 |
| Physcomitrium patens | Chr17 | 5 | CH_ppa_250 | 2 | 2 | 0.000183818 |
| Prunus persica | Pp04 | 5 | CH_ppe_145 | 6 | 9 | 0.000000000000169029 |
| Prunus persica | Pp03 | 5 | CH_ppe_270 | 4 | 4 | 0.00000000603413 |
| Prunus persica | Pp04 | 5 | CH_ppe_65 | 8 | 10 | 2.29494e-20 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_159 | 5 | 5 | 0.000000000000102666 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_390 | 4 | 7 | 0.0000000151803 |
| Papaver somniferum | NW_020624377.1 | 5 | CH_pso_760 | 3 | 5 | 0.0000175045 |
| Populus trichocarpa | Chr11 | 5 | CH_ptr_278 | 3 | 4 | 0.0000000200451 |
| Quercus lobata | 5 | 5 | CH_qlo_455 | 4 | 7 | 0.00000000001445 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_1013 | 4 | 14 | 0.0000434896 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1191 | 3 | 4 | 0.000186763 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_1357 | 3 | 5 | 0.00046657 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_186 | 10 | 77 | 0.0000000000000108622 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_305 | 7 | 26 | 0.0000000000204731 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_589 | 6 | 42 | 0.000000183706 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_577 | 2 | 2 | 0.000136494 |
| Salix brachista | GWHAAZH00000011 | 5 | CH_sbr_266 | 3 | 5 | 0.000000238227 |
| Sechium edule | LG06 | 5 | CH_sed_52 | 5 | 5 | 0.0000000000012025 |
| Sechium edule | LG05 | 5 | CH_sed_53 | 5 | 5 | 0.0000000000012025 |
| Schrenkiella parvula | ch3-1 | 5 | CH_spa_163 | 3 | 5 | 0.0000032536 |
| Schrenkiella parvula | ch1-1 | 5 | CH_spa_384 | 3 | 26 | 0.000843141 |
| Theobroma cacao | Chromosome_6 | 5 | CH_tca_168 | 4 | 8 | 0.0000000000824943 |
| Tarenaya hassleriana | NW_010969548.1 | 5 | CH_tha_48 | 4 | 4 | 0.0000000000715663 |
| Tripterygium wilfordii | NC_052243.1 | 5 | CH_twi_38 | 5 | 7 | 0.00000000000000912979 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_241 | 3 | 4 | 0.0000227135 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_27 | 8 | 9 | 9.60336e-22 |
| Actinidia chinensis | Lachesis_group27 | 6 | CH_ach_118 | 3 | 5 | 0.000000177036 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_151 | 5 | 33 | 0.00000000188619 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 6 | CH_amhyb_106 | 3 | 3 | 0.000000106286 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 6 | CH_amhyb_467 | 2 | 2 | 0.000841751 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_67 | 6 | 40 | 0.000000000000139945 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1222 | 3 | 5 | 0.0000409952 |
| Brassica carinata | ChrC05 | 6 | CH_bca_130 | 7 | 38 | 0.000000000000471505 |
| Brassica carinata | ChrC07 | 6 | CH_bca_478 | 4 | 7 | 0.0000000475285 |
| Brassica carinata | ChrB02 | 6 | CH_bca_646 | 5 | 42 | 0.000000367038 |
| Brassica carinata | ChrC07 | 6 | CH_bca_941 | 3 | 3 | 0.00000410164 |
| Brassica napus | C05 | 6 | CH_bna_1039 | 3 | 5 | 0.000078403 |
| Brassica napus | A10 | 6 | CH_bna_1171 | 4 | 37 | 0.000204598 |
| Brassica napus | A09 | 6 | CH_bna_311 | 4 | 4 | 0.00000000313086 |
| Brassica napus | C08 | 6 | CH_bna_355 | 5 | 18 | 0.0000000104123 |
| Brassica napus | A03 | 6 | CH_bna_366 | 4 | 6 | 0.0000000156493 |
| Brassica napus | C05 | 6 | CH_bna_484 | 5 | 31 | 0.000000205611 |
| Brassica napus | A05 | 6 | CH_bna_926 | 3 | 4 | 0.0000313709 |
| Brassica napus | C08 | 6 | CH_bna_927 | 3 | 4 | 0.0000313709 |
| Brassica oleracea | C8 | 6 | CH_bol_158 | 5 | 20 | 0.00000000348261 |
| Brassica oleracea | C8 | 6 | CH_bol_439 | 3 | 4 | 0.00000986957 |
| Brassica oleracea | C5 | 6 | CH_bol_474 | 4 | 29 | 0.0000180883 |
| Brassica oleracea | C3 | 6 | CH_bol_497 | 3 | 5 | 0.0000246678 |
| Brassica rapa | A03 | 6 | CH_bra_119 | 4 | 5 | 0.00000000710184 |
| Brassica rapa | A09 | 6 | CH_bra_297 | 3 | 4 | 0.0000147037 |
| Brassica rapa | A05 | 6 | CH_bra_362 | 3 | 6 | 0.0000734727 |
| Brassica rapa | A10 | 6 | CH_bra_375 | 4 | 38 | 0.000103765 |
| Camellia sinensis var. sinensis | Chr15 | 6 | CH_camsi_1183 | 2 | 4 | 0.000275116 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_403 | 2 | 2 | 0.0000656642 |
| Citrullus lanatus | CG_Chr07 | 6 | CH_cla_4 | 9 | 11 | 1.45455e-23 |
| Cucumis melo | chr07 | 6 | CH_cme_15 | 9 | 11 | 1.53143e-25 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 6 | CH_cqu_846 | 2 | 2 | 0.000284293 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3333 | 6 | CH_cqu_847 | 2 | 2 | 0.000284293 |
| Chlamydomonas reinhardtii | chromosome_4 | 6 | CH_cre_130 | 3 | 22 | 0.000119303 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_262 | 3 | 3 | 0.000000280668 |
| Cucumis sativus L. | chr1 | 6 | CH_csa_236 | 3 | 3 | 0.00000229961 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_28 | 7 | 7 | 2.11162e-20 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_311 | 3 | 3 | 0.000000498357 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_115 | 5 | 27 | 0.00000000113707 |
| Fragaria x ananassa | Fvb6-3 | 6 | CH_fan_1040 | 3 | 9 | 0.000425551 |
| Fragaria x ananassa | Fvb6-4 | 6 | CH_fan_1259 | 3 | 11 | 0.000835459 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_591 | 4 | 19 | 0.00000670485 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_224 | 5 | 22 | 0.00000000305019 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_138 | 6 | 9 | 0.0000000000000374625 |
| Helianthus annuus | HanXRQChr04 | 6 | CH_han_570 | 4 | 13 | 0.00000184458 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_594 | 4 | 14 | 0.00000258148 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_1193 | 3 | 20 | 0.000733634 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_192 | 6 | 20 | 0.00000000000014086 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_202 | 5 | 12 | 0.000000000256106 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_396 | 4 | 12 | 0.000000478878 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_524 | 3 | 4 | 0.0000107766 |
| Malus domestica | Chr09 | 6 | CH_mdo_554 | 3 | 3 | 0.00000061692 |
| Olea europaea | chr12 | 6 | CH_oeu_408 | 2 | 3 | 0.000160132 |
| Physcomitrium patens | Chr17 | 6 | CH_ppa_250 | 2 | 2 | 0.000183818 |
| Prunus persica | Pp04 | 6 | CH_ppe_145 | 6 | 9 | 0.000000000000169029 |
| Prunus persica | Pp03 | 6 | CH_ppe_270 | 4 | 4 | 0.00000000603413 |
| Prunus persica | Pp04 | 6 | CH_ppe_65 | 8 | 10 | 2.29494e-20 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_159 | 5 | 5 | 0.000000000000102666 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_390 | 4 | 7 | 0.0000000151803 |
| Papaver somniferum | NW_020624377.1 | 6 | CH_pso_760 | 3 | 5 | 0.0000175045 |
| Populus trichocarpa | Chr11 | 6 | CH_ptr_278 | 3 | 4 | 0.0000000200451 |
| Quercus lobata | 5 | 6 | CH_qlo_455 | 4 | 7 | 0.00000000001445 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_1013 | 4 | 14 | 0.0000434896 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1191 | 3 | 4 | 0.000186763 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_1357 | 3 | 5 | 0.00046657 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_186 | 10 | 77 | 0.0000000000000108622 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_305 | 7 | 26 | 0.0000000000204731 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_589 | 6 | 42 | 0.000000183706 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_577 | 2 | 2 | 0.000136494 |
| Salix brachista | GWHAAZH00000011 | 6 | CH_sbr_266 | 3 | 5 | 0.000000238227 |
| Sechium edule | LG06 | 6 | CH_sed_52 | 5 | 5 | 0.0000000000012025 |
| Sechium edule | LG05 | 6 | CH_sed_53 | 5 | 5 | 0.0000000000012025 |
| Schrenkiella parvula | ch3-1 | 6 | CH_spa_163 | 3 | 5 | 0.0000032536 |
| Schrenkiella parvula | ch1-1 | 6 | CH_spa_384 | 3 | 26 | 0.000843141 |
| Theobroma cacao | Chromosome_6 | 6 | CH_tca_168 | 4 | 8 | 0.0000000000824943 |
| Tarenaya hassleriana | NW_010969548.1 | 6 | CH_tha_48 | 4 | 4 | 0.0000000000715663 |
| Tripterygium wilfordii | NC_052243.1 | 6 | CH_twi_38 | 5 | 7 | 0.00000000000000912979 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |