Functional clusters
Information
- Type InterPro
- Description Copper amine oxidase, N2-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | ctg752_3 | 5 | CH_acertr_652 | 3 | 9 | 0.0000750472 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_154 | 3 | 3 | 0.000000192964 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 5 | CH_arhy_575 | 3 | 3 | 0.000000489389 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 5 | CH_arhy_576 | 3 | 3 | 0.000000489389 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_289 | 3 | 10 | 0.00000241246 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 5 | CH_bvu_121 | 4 | 9 | 0.00000000321636 |
| Coffea canephora | chr3 | 5 | CH_ccan_83 | 3 | 3 | 0.000000000272075 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_87 | 6 | 8 | 6.55349e-17 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_135 | 4 | 5 | 0.00000000009774 |
| Carya illinoinensis | Chr02 | 5 | CH_cil_218 | 4 | 5 | 0.000000000250027 |
| Durio zibethinus | NW_019168026.1 | 5 | CH_dzi_305 | 3 | 7 | 0.00000631313 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_524 | 2 | 2 | 0.000761499 |
| Glycine max | Gm20 | 5 | CH_gma_168 | 4 | 4 | 0.000000000117296 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_517 | 3 | 4 | 0.000000501703 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 5 | CH_lsa_824 | 2 | 2 | 0.000514007 |
| Petunia axillaris | Peaxi162Scf00092 | 5 | CH_pax_217 | 3 | 3 | 0.00000025988 |
| Physcomitrium patens | Chr17 | 5 | CH_ppa_417 | 2 | 2 | 0.000919089 |
| Prunus persica | Pp01 | 5 | CH_ppe_348 | 3 | 3 | 0.000000166944 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_720 | 3 | 33 | 0.000776995 |
| Populus trichocarpa | Chr10 | 5 | CH_ptr_342 | 3 | 3 | 0.00000028064 |
| Sechium edule | LG04 | 5 | CH_sed_72 | 4 | 4 | 0.0000000000381303 |
| Solanum pennellii | Spenn-ch09 | 5 | CH_spe_912 | 2 | 2 | 0.00093406 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_454 | 3 | 5 | 0.00000330801 |
| Vigna mungo | CM024071.1 | 5 | CH_vmu_93 | 4 | 5 | 0.000000000509818 |
| Vitis vinifera | chr5 | 5 | CH_vvi_195 | 4 | 7 | 0.00000000161681 |
| Acer truncatum | ctg752_3 | 6 | CH_acertr_652 | 3 | 9 | 0.0000750472 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_154 | 3 | 3 | 0.000000192964 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 6 | CH_arhy_575 | 3 | 3 | 0.000000489389 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 6 | CH_arhy_576 | 3 | 3 | 0.000000489389 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_289 | 3 | 10 | 0.00000241246 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 6 | CH_bvu_121 | 4 | 9 | 0.00000000321636 |
| Coffea canephora | chr3 | 6 | CH_ccan_83 | 3 | 3 | 0.000000000272075 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_87 | 6 | 8 | 6.55349e-17 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_135 | 4 | 5 | 0.00000000009774 |
| Carya illinoinensis | Chr02 | 6 | CH_cil_218 | 4 | 5 | 0.000000000250027 |
| Durio zibethinus | NW_019168026.1 | 6 | CH_dzi_305 | 3 | 7 | 0.00000631313 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_524 | 2 | 2 | 0.000761499 |
| Glycine max | Gm20 | 6 | CH_gma_168 | 4 | 4 | 0.000000000117296 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_517 | 3 | 4 | 0.000000501703 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 6 | CH_lsa_824 | 2 | 2 | 0.000514007 |
| Petunia axillaris | Peaxi162Scf00092 | 6 | CH_pax_217 | 3 | 3 | 0.00000025988 |
| Physcomitrium patens | Chr17 | 6 | CH_ppa_417 | 2 | 2 | 0.000919089 |
| Prunus persica | Pp01 | 6 | CH_ppe_348 | 3 | 3 | 0.000000166944 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_720 | 3 | 33 | 0.000776995 |
| Populus trichocarpa | Chr10 | 6 | CH_ptr_342 | 3 | 3 | 0.00000028064 |
| Sechium edule | LG04 | 6 | CH_sed_72 | 4 | 4 | 0.0000000000381303 |
| Solanum pennellii | Spenn-ch09 | 6 | CH_spe_912 | 2 | 2 | 0.00093406 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_454 | 3 | 5 | 0.00000330801 |
| Vigna mungo | CM024071.1 | 6 | CH_vmu_93 | 4 | 5 | 0.000000000509818 |
| Vitis vinifera | chr5 | 6 | CH_vvi_195 | 4 | 7 | 0.00000000161681 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |