Functional clusters

Information

  • Type InterPro
  • Description Translation initiation factor IF- 2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr4 5 CH_camsi_1545 2 2 0.000962949
Coffea canephora chr1 5 CH_ccan_698 2 2 0.000728273
Corchorus olitorius AWUE01014828.1 5 CH_col_157 2 2 0.000292099
Magnolia biondii Chr14 5 CH_mbi_1267 2 3 0.00087414
Oryza sativa ssp. japonica chr01 5 CH_osa_752 2 2 0.000792184
Physcomitrium patens Chr26 5 CH_ppa_55 3 3 0.000000197109
Papaver somniferum NC_039363.1 5 CH_pso_290 4 8 0.000000000504182
Salix brachista GWHAAZH00000016 5 CH_sbr_225 5 52 0.0000000384832
Sequoiadendron giganteum chr4 5 CH_sgi_2447 2 2 0.000487151
Solanum pennellii Spenn-ch03 5 CH_spe_911 2 2 0.00093406
Selenicereus undatus Scaffold_33673 5 CH_sun_389 2 2 0.000726639
Trifolium pratense Tp57577_TGAC_v2_LG5 5 CH_tpr_770 2 2 0.000756974
Zea mays 6 5 CH_zma_493 2 2 0.000511313
Camellia sinensis var. sinensis Chr4 6 CH_camsi_1545 2 2 0.000962949
Coffea canephora chr1 6 CH_ccan_698 2 2 0.000728273
Corchorus olitorius AWUE01014828.1 6 CH_col_157 2 2 0.000292099
Magnolia biondii Chr14 6 CH_mbi_1267 2 3 0.00087414
Oryza sativa ssp. japonica chr01 6 CH_osa_752 2 2 0.000792184
Physcomitrium patens Chr26 6 CH_ppa_55 3 3 0.000000197109
Papaver somniferum NC_039363.1 6 CH_pso_290 4 8 0.000000000504182
Salix brachista GWHAAZH00000016 6 CH_sbr_225 5 52 0.0000000384832
Sequoiadendron giganteum chr4 6 CH_sgi_2447 2 2 0.000487151
Solanum pennellii Spenn-ch03 6 CH_spe_911 2 2 0.00093406
Selenicereus undatus Scaffold_33673 6 CH_sun_389 2 2 0.000726639
Trifolium pratense Tp57577_TGAC_v2_LG5 6 CH_tpr_770 2 2 0.000756974
Zea mays 6 6 CH_zma_493 2 2 0.000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001