Functional clusters
Information
- Type InterPro
- Description Achaete-scute transcription factor-related
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr1 | 5 | CH_acertr_170 | 4 | 5 | 0.000000002601 |
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_330 | 3 | 3 | 0.00000297347 |
| Avicennia marina | ScioBoG_8578_HRSCAF_8617 | 5 | CH_ama_60 | 3 | 3 | 0.000000624499 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1236 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1237 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB02 | 5 | CH_bca_1238 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB02 | 5 | CH_bca_1239 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB08 | 5 | CH_bca_1240 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB01 | 5 | CH_bca_1497 | 3 | 4 | 0.000185027 |
| Brassica carinata | ChrC07 | 5 | CH_bca_28 | 9 | 12 | 1.70486e-21 |
| Brassica carinata | ChrC07 | 5 | CH_bca_466 | 4 | 4 | 0.0000000356187 |
| Brassica carinata | ChrC02 | 5 | CH_bca_871 | 4 | 8 | 0.00000248715 |
| Brassica napus | C08 | 5 | CH_bna_1195 | 3 | 5 | 0.000247351 |
| Brassica napus | A04 | 5 | CH_bna_248 | 5 | 8 | 0.000000000480811 |
| Brassica napus | C04 | 5 | CH_bna_277 | 5 | 9 | 0.0000000010813 |
| Brassica napus | C06 | 5 | CH_bna_488 | 4 | 6 | 0.000000220374 |
| Brassica napus | A09 | 5 | CH_bna_889 | 3 | 3 | 0.0000247577 |
| Brassica oleracea | C8 | 5 | CH_bol_428 | 3 | 3 | 0.0000087438 |
| Brassica oleracea | C4 | 5 | CH_bol_522 | 3 | 4 | 0.0000349618 |
| Brassica oleracea | C6 | 5 | CH_bol_523 | 3 | 4 | 0.0000349618 |
| Brassica rapa | A04 | 5 | CH_bra_186 | 4 | 8 | 0.000000393976 |
| Brassica rapa | A09 | 5 | CH_bra_284 | 3 | 3 | 0.0000101023 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_223 | 4 | 9 | 0.000000654834 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 5 | CH_bvu_273 | 3 | 3 | 0.00000839022 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_274 | 3 | 3 | 0.00000839022 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 5 | CH_bvu_80 | 5 | 6 | 0.0000000000181107 |
| Cannabis sativa | NC_044379.1 | 5 | CH_cansat_162 | 4 | 6 | 0.0000000091057 |
| Corylus avellana | 10 | 5 | CH_cav_123 | 5 | 10 | 0.0000000000839444 |
| Coffea canephora | chr5 | 5 | CH_ccan_161 | 4 | 43 | 0.0000000520064 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_157 | 5 | 7 | 0.0000000000214054 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_410 | 3 | 3 | 0.0000045928 |
| Carya illinoinensis | Chr11 | 5 | CH_cil_457 | 3 | 3 | 0.00000391883 |
| Carya illinoinensis | Chr12 | 5 | CH_cil_458 | 3 | 3 | 0.00000391883 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_459 | 3 | 3 | 0.00000391883 |
| Citrullus lanatus | CG_Chr04 | 5 | CH_cla_170 | 3 | 4 | 0.0000171812 |
| Citrullus lanatus | CG_Chr01 | 5 | CH_cla_26 | 5 | 5 | 0.000000000000930165 |
| Carica papaya | supercontig_5 | 5 | CH_cpa_191 | 3 | 3 | 0.00000113879 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3796 | 5 | CH_cqu_239 | 4 | 4 | 0.00000000403726 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3970 | 5 | CH_cqu_296 | 4 | 6 | 0.0000000605078 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1783 | 5 | CH_cqu_532 | 3 | 3 | 0.00000774566 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_235 | 3 | 3 | 0.00000229961 |
| Daucus carota | DCARv2_Chr6 | 5 | CH_dca_455 | 3 | 9 | 0.0000844544 |
| Davidia involucrata | GWHABJS00000018 | 5 | CH_din_201 | 4 | 5 | 0.00000000908874 |
| Davidia involucrata | GWHABJS00000008 | 5 | CH_din_413 | 3 | 4 | 0.0000171031 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_338 | 3 | 4 | 0.00000101471 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_568 | 4 | 4 | 0.0000000036 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_569 | 4 | 4 | 0.0000000036 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_928 | 3 | 3 | 0.000006834 |
| Eutrema salsugineum | scaffold_19 | 5 | CH_esa_237 | 3 | 3 | 0.00000316627 |
| Fragaria vesca | Fvb7 | 5 | CH_fve_366 | 3 | 3 | 0.000000437284 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_330 | 4 | 5 | 0.00000000419278 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_693 | 3 | 4 | 0.0000102115 |
| Hydrangea macrophylla | Hma1.2p1_0176F.1 | 5 | CH_hma_207 | 3 | 4 | 0.0000062179 |
| Lotus japonicus | chr5 | 5 | CH_lja_284 | 3 | 3 | 0.00000219371 |
| Lotus japonicus | chr1 | 5 | CH_lja_285 | 3 | 3 | 0.00000219371 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_113 | 5 | 6 | 0.0000000000000791585 |
| Magnolia biondii | Chr11 | 5 | CH_mbi_333 | 4 | 8 | 0.0000000171874 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_641 | 3 | 5 | 0.0000101147 |
| Malus domestica | Chr17 | 5 | CH_mdo_817 | 3 | 8 | 0.0000345197 |
| Manihot esculenta | Chromosome06 | 5 | CH_mes_362 | 3 | 3 | 0.00000159966 |
| Medicago truncatula | chr2 | 5 | CH_mtr_296 | 5 | 11 | 0.0000000000296211 |
| Medicago truncatula | chr1 | 5 | CH_mtr_783 | 3 | 4 | 0.00000460762 |
| Nelumbo nucifera | chr3 | 5 | CH_nnu_346 | 3 | 9 | 0.000024538 |
| Olea europaea | chr2 | 5 | CH_oeu_117 | 4 | 5 | 0.000000024233 |
| Olea europaea | scaffold349 | 5 | CH_oeu_242 | 3 | 3 | 0.00000865072 |
| Olea europaea | chr1 | 5 | CH_oeu_25 | 7 | 12 | 4.98486e-16 |
| Olea europaea | chr1 | 5 | CH_oeu_380 | 3 | 5 | 0.0000864299 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_694 | 2 | 3 | 0.000475289 |
| Prunus persica | Pp07 | 5 | CH_ppe_185 | 5 | 8 | 0.0000000000260175 |
| Prunus persica | Pp02 | 5 | CH_ppe_442 | 3 | 3 | 0.00000303839 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_100 | 5 | 11 | 0.0000000000513007 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_370 | 3 | 5 | 0.00001485 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_563 | 3 | 3 | 0.000000737765 |
| Populus trichocarpa | Chr19 | 5 | CH_ptr_433 | 3 | 3 | 0.00000340777 |
| Phaseolus vulgaris | Chr05 | 5 | CH_pvu_331 | 3 | 3 | 0.00000231593 |
| Quercus lobata | 12 | 5 | CH_qlo_222 | 6 | 6 | 1.41669e-17 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_882 | 3 | 7 | 0.0000137594 |
| Rhododendron simsii | chr03 | 5 | CH_rsi_253 | 4 | 4 | 0.00000000016931 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_28 | 12 | 31 | 2.87064e-30 |
| Sechium edule | LG01 | 5 | CH_sed_238 | 3 | 3 | 0.00000347383 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_239 | 7 | 7 | 1.24669e-18 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_365 | 9 | 48 | 0.0000000000000155613 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_531 | 5 | 5 | 0.00000000000415189 |
| Solanum lycopersicum | SL4.0ch10 | 5 | CH_sly_150 | 5 | 6 | 0.00000000000620882 |
| Solanum lycopersicum | SL4.0ch03 | 5 | CH_sly_450 | 3 | 3 | 0.00000500744 |
| Solanum lycopersicum | SL4.0ch10 | 5 | CH_sly_514 | 3 | 4 | 0.0000200221 |
| Schrenkiella parvula | ch6-6 | 5 | CH_spa_188 | 3 | 4 | 0.0000135343 |
| Solanum pennellii | Spenn-ch10 | 5 | CH_spe_412 | 3 | 4 | 0.00000432 |
| Selenicereus undatus | Scaffold_3410 | 5 | CH_sun_70 | 4 | 7 | 0.0000000199272 |
| Theobroma cacao | Chromosome_3 | 5 | CH_tca_425 | 3 | 3 | 0.00000547137 |
| Theobroma cacao | Chromosome_2 | 5 | CH_tca_564 | 3 | 6 | 0.000109289 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_655 | 3 | 8 | 0.000305752 |
| Tripterygium wilfordii | NC_052237.1 | 5 | CH_twi_131 | 4 | 6 | 0.00000000557323 |
| Vigna mungo | CM024079.1 | 5 | CH_vmu_225 | 3 | 3 | 0.00000179112 |
| Vitis vinifera | chr16 | 5 | CH_vvi_371 | 3 | 3 | 0.00000143198 |
| Acer truncatum | chr1 | 6 | CH_acertr_170 | 4 | 5 | 0.000000002601 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_330 | 3 | 3 | 0.00000297347 |
| Avicennia marina | ScioBoG_8578_HRSCAF_8617 | 6 | CH_ama_60 | 3 | 3 | 0.000000624499 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1236 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1237 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB02 | 6 | CH_bca_1238 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB02 | 6 | CH_bca_1239 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB08 | 6 | CH_bca_1240 | 3 | 3 | 0.000046284 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1497 | 3 | 4 | 0.000185027 |
| Brassica carinata | ChrC07 | 6 | CH_bca_28 | 9 | 12 | 1.70486e-21 |
| Brassica carinata | ChrC07 | 6 | CH_bca_466 | 4 | 4 | 0.0000000356187 |
| Brassica carinata | ChrC02 | 6 | CH_bca_871 | 4 | 8 | 0.00000248715 |
| Brassica napus | C08 | 6 | CH_bna_1195 | 3 | 5 | 0.000247351 |
| Brassica napus | A04 | 6 | CH_bna_248 | 5 | 8 | 0.000000000480811 |
| Brassica napus | C04 | 6 | CH_bna_277 | 5 | 9 | 0.0000000010813 |
| Brassica napus | C06 | 6 | CH_bna_488 | 4 | 6 | 0.000000220374 |
| Brassica napus | A09 | 6 | CH_bna_889 | 3 | 3 | 0.0000247577 |
| Brassica oleracea | C8 | 6 | CH_bol_428 | 3 | 3 | 0.0000087438 |
| Brassica oleracea | C4 | 6 | CH_bol_522 | 3 | 4 | 0.0000349618 |
| Brassica oleracea | C6 | 6 | CH_bol_523 | 3 | 4 | 0.0000349618 |
| Brassica rapa | A04 | 6 | CH_bra_186 | 4 | 8 | 0.000000393976 |
| Brassica rapa | A09 | 6 | CH_bra_284 | 3 | 3 | 0.0000101023 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_223 | 4 | 9 | 0.000000654834 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 6 | CH_bvu_273 | 3 | 3 | 0.00000839022 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_274 | 3 | 3 | 0.00000839022 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 6 | CH_bvu_80 | 5 | 6 | 0.0000000000181107 |
| Cannabis sativa | NC_044379.1 | 6 | CH_cansat_162 | 4 | 6 | 0.0000000091057 |
| Corylus avellana | 10 | 6 | CH_cav_123 | 5 | 10 | 0.0000000000839444 |
| Coffea canephora | chr5 | 6 | CH_ccan_161 | 4 | 43 | 0.0000000520064 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_157 | 5 | 7 | 0.0000000000214054 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_410 | 3 | 3 | 0.0000045928 |
| Carya illinoinensis | Chr11 | 6 | CH_cil_457 | 3 | 3 | 0.00000391883 |
| Carya illinoinensis | Chr12 | 6 | CH_cil_458 | 3 | 3 | 0.00000391883 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_459 | 3 | 3 | 0.00000391883 |
| Citrullus lanatus | CG_Chr04 | 6 | CH_cla_170 | 3 | 4 | 0.0000171812 |
| Citrullus lanatus | CG_Chr01 | 6 | CH_cla_26 | 5 | 5 | 0.000000000000930165 |
| Cucumis melo | chr09 | 6 | CH_cme_241 | 3 | 4 | 0.00000763494 |
| Carica papaya | supercontig_5 | 6 | CH_cpa_191 | 3 | 3 | 0.00000113879 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3796 | 6 | CH_cqu_239 | 4 | 4 | 0.00000000403726 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3970 | 6 | CH_cqu_296 | 4 | 6 | 0.0000000605078 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1783 | 6 | CH_cqu_532 | 3 | 3 | 0.00000774566 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_235 | 3 | 3 | 0.00000229961 |
| Daucus carota | DCARv2_Chr6 | 6 | CH_dca_455 | 3 | 9 | 0.0000844544 |
| Davidia involucrata | GWHABJS00000018 | 6 | CH_din_201 | 4 | 5 | 0.00000000908874 |
| Davidia involucrata | GWHABJS00000008 | 6 | CH_din_413 | 3 | 4 | 0.0000171031 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_338 | 3 | 4 | 0.00000101471 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_568 | 4 | 4 | 0.0000000036 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_569 | 4 | 4 | 0.0000000036 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_928 | 3 | 3 | 0.000006834 |
| Eutrema salsugineum | scaffold_19 | 6 | CH_esa_237 | 3 | 3 | 0.00000316627 |
| Fragaria x ananassa | Fvb7-1 | 6 | CH_fan_503 | 3 | 3 | 0.00000230854 |
| Fragaria vesca | Fvb7 | 6 | CH_fve_366 | 3 | 3 | 0.000000437284 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_330 | 4 | 5 | 0.00000000419278 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_693 | 3 | 4 | 0.0000102115 |
| Hydrangea macrophylla | Hma1.2p1_0176F.1 | 6 | CH_hma_207 | 3 | 4 | 0.0000062179 |
| Lotus japonicus | chr5 | 6 | CH_lja_284 | 3 | 3 | 0.00000219371 |
| Lotus japonicus | chr1 | 6 | CH_lja_285 | 3 | 3 | 0.00000219371 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_113 | 5 | 6 | 0.0000000000000791585 |
| Magnolia biondii | Chr11 | 6 | CH_mbi_333 | 4 | 8 | 0.0000000171874 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_641 | 3 | 5 | 0.0000101147 |
| Malus domestica | Chr17 | 6 | CH_mdo_817 | 3 | 8 | 0.0000345197 |
| Manihot esculenta | Chromosome06 | 6 | CH_mes_362 | 3 | 3 | 0.00000159966 |
| Medicago truncatula | chr2 | 6 | CH_mtr_296 | 5 | 11 | 0.0000000000296211 |
| Medicago truncatula | chr1 | 6 | CH_mtr_783 | 3 | 4 | 0.00000460762 |
| Nelumbo nucifera | chr3 | 6 | CH_nnu_346 | 3 | 9 | 0.000024538 |
| Olea europaea | chr2 | 6 | CH_oeu_117 | 4 | 5 | 0.000000024233 |
| Olea europaea | scaffold349 | 6 | CH_oeu_242 | 3 | 3 | 0.00000865072 |
| Olea europaea | chr1 | 6 | CH_oeu_25 | 7 | 12 | 4.98486e-16 |
| Olea europaea | chr1 | 6 | CH_oeu_380 | 3 | 5 | 0.0000864299 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_694 | 2 | 3 | 0.000475289 |
| Prunus persica | Pp07 | 6 | CH_ppe_185 | 5 | 8 | 0.0000000000260175 |
| Prunus persica | Pp02 | 6 | CH_ppe_442 | 3 | 3 | 0.00000303839 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_100 | 5 | 11 | 0.0000000000513007 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_370 | 3 | 5 | 0.00001485 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_563 | 3 | 3 | 0.000000737765 |
| Populus trichocarpa | Chr19 | 6 | CH_ptr_433 | 3 | 3 | 0.00000340777 |
| Phaseolus vulgaris | Chr05 | 6 | CH_pvu_331 | 3 | 3 | 0.00000231593 |
| Quercus lobata | 12 | 6 | CH_qlo_222 | 6 | 6 | 1.41669e-17 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_882 | 3 | 7 | 0.0000137594 |
| Rhododendron simsii | chr03 | 6 | CH_rsi_253 | 4 | 4 | 0.00000000016931 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_28 | 12 | 31 | 2.87064e-30 |
| Sechium edule | LG01 | 6 | CH_sed_238 | 3 | 3 | 0.00000347383 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_239 | 7 | 7 | 1.24669e-18 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_365 | 9 | 48 | 0.0000000000000155613 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_531 | 5 | 5 | 0.00000000000415189 |
| Solanum lycopersicum | SL4.0ch10 | 6 | CH_sly_150 | 5 | 6 | 0.00000000000620882 |
| Solanum lycopersicum | SL4.0ch03 | 6 | CH_sly_450 | 3 | 3 | 0.00000500744 |
| Solanum lycopersicum | SL4.0ch10 | 6 | CH_sly_514 | 3 | 4 | 0.0000200221 |
| Schrenkiella parvula | ch6-6 | 6 | CH_spa_188 | 3 | 4 | 0.0000135343 |
| Solanum pennellii | Spenn-ch10 | 6 | CH_spe_412 | 3 | 4 | 0.00000432 |
| Selenicereus undatus | Scaffold_3410 | 6 | CH_sun_70 | 4 | 7 | 0.0000000199272 |
| Theobroma cacao | Chromosome_3 | 6 | CH_tca_425 | 3 | 3 | 0.00000547137 |
| Theobroma cacao | Chromosome_2 | 6 | CH_tca_564 | 3 | 6 | 0.000109289 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_655 | 3 | 8 | 0.000305752 |
| Tripterygium wilfordii | NC_052237.1 | 6 | CH_twi_131 | 4 | 6 | 0.00000000557323 |
| Vigna mungo | CM024079.1 | 6 | CH_vmu_225 | 3 | 3 | 0.00000179112 |
| Vitis vinifera | chr16 | 6 | CH_vvi_371 | 3 | 3 | 0.00000143198 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |