Functional clusters
Information
- Type InterPro
- Description Protein phosphatase 2C family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Corylus avellana | 10 | 5 | CH_cav_300 | 4 | 7 | 0.00000129374 |
| Gossypium hirsutum | A04 | 5 | CH_ghi_808 | 4 | 11 | 0.0000523135 |
| Helianthus annuus | HanXRQChr01 | 5 | CH_han_750 | 4 | 13 | 0.000021943 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_1285 | 3 | 8 | 0.000980026 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_367 | 5 | 17 | 0.0000000516464 |
| Malus domestica | Chr05 | 5 | CH_mdo_583 | 4 | 7 | 0.00000111189 |
| Nicotiana tabacum | Nitab4.5_0000535 | 5 | CH_nta_162 | 3 | 3 | 0.0000278141 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_138 | 6 | 14 | 0.0000000000514876 |
| Petunia axillaris | Peaxi162Scf00094 | 5 | CH_pax_594 | 3 | 5 | 0.000367698 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_1416 | 3 | 9 | 0.000654465 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_592 | 3 | 3 | 0.0000204636 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1421 | 3 | 3 | 0.00000630447 |
| Sapria himalayana | scaffold37_5694058 | 5 | CH_shi_217 | 3 | 6 | 0.00000823575 |
| Zea mays | 4 | 5 | CH_zma_358 | 3 | 3 | 0.0000816697 |
| Corylus avellana | 10 | 6 | CH_cav_300 | 4 | 7 | 0.00000129374 |
| Gossypium hirsutum | A04 | 6 | CH_ghi_808 | 4 | 11 | 0.0000523135 |
| Helianthus annuus | HanXRQChr01 | 6 | CH_han_750 | 4 | 13 | 0.000021943 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_1285 | 3 | 8 | 0.000980026 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_367 | 5 | 17 | 0.0000000516464 |
| Malus domestica | Chr05 | 6 | CH_mdo_583 | 4 | 7 | 0.00000111189 |
| Nicotiana tabacum | Nitab4.5_0000535 | 6 | CH_nta_162 | 3 | 3 | 0.0000278141 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_138 | 6 | 14 | 0.0000000000514876 |
| Petunia axillaris | Peaxi162Scf00094 | 6 | CH_pax_594 | 3 | 5 | 0.000367698 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_1416 | 3 | 9 | 0.000654465 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_592 | 3 | 3 | 0.0000204636 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1421 | 3 | 3 | 0.00000630447 |
| Sapria himalayana | scaffold37_5694058 | 6 | CH_shi_217 | 3 | 6 | 0.00000823575 |
| Zea mays | 4 | 6 | CH_zma_358 | 3 | 3 | 0.0000816697 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |