Functional clusters
Information
- Type InterPro
- Description Aldose 1-epimerase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cannabis sativa | NC_044379.1 | 5 | CH_cansat_319 | 3 | 14 | 0.0000117634 |
| Capsicum annuum | PGAv.1.6.scaffold206 | 5 | CH_can_46 | 7 | 7 | 9.0164e-22 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_765 | 2 | 2 | 0.000820311 |
| Carica papaya | supercontig_14 | 5 | CH_cpa_474 | 2 | 2 | 0.000285198 |
| Durio zibethinus | NW_019168470.1 | 5 | CH_dzi_603 | 2 | 3 | 0.000834235 |
| Lotus japonicus | chr2 | 5 | CH_lja_587 | 2 | 2 | 0.000715077 |
| Medicago truncatula | chr6 | 5 | CH_mtr_1273 | 2 | 2 | 0.000410863 |
| Papaver somniferum | NW_020621603.1 | 5 | CH_pso_958 | 2 | 2 | 0.000135176 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_326 | 3 | 3 | 0.0000001754 |
| Salix brachista | GWHAAZH00000017 | 5 | CH_sbr_139 | 4 | 5 | 0.0000000000562987 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_57 | 5 | 5 | 6.16538e-16 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_95 | 5 | 5 | 0.00000000000000108633 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_563 | 2 | 2 | 0.000278772 |
| Cannabis sativa | NC_044379.1 | 6 | CH_cansat_319 | 3 | 14 | 0.0000117634 |
| Capsicum annuum | PGAv.1.6.scaffold206 | 6 | CH_can_46 | 7 | 7 | 9.0164e-22 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_765 | 2 | 2 | 0.000820311 |
| Cucumis melo | chr02 | 6 | CH_cme_454 | 2 | 2 | 0.000667111 |
| Carica papaya | supercontig_14 | 6 | CH_cpa_474 | 2 | 2 | 0.000285198 |
| Durio zibethinus | NW_019168470.1 | 6 | CH_dzi_603 | 2 | 3 | 0.000834235 |
| Lotus japonicus | chr2 | 6 | CH_lja_587 | 2 | 2 | 0.000715077 |
| Medicago truncatula | chr6 | 6 | CH_mtr_1273 | 2 | 2 | 0.000410863 |
| Papaver somniferum | NW_020621603.1 | 6 | CH_pso_958 | 2 | 2 | 0.000135176 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_326 | 3 | 3 | 0.0000001754 |
| Salix brachista | GWHAAZH00000017 | 6 | CH_sbr_139 | 4 | 5 | 0.0000000000562987 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_57 | 5 | 5 | 6.16538e-16 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_95 | 5 | 5 | 0.00000000000000108633 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_563 | 2 | 2 | 0.000278772 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |