Functional clusters
Information
- Type InterPro
- Description Formin, FH2 domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 5 | CH_aar_109 | 4 | 4 | 0.00000000414669 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_127 | 4 | 4 | 0.000000000516049 |
| Brassica carinata | Contig74 | 5 | CH_bca_1151 | 3 | 3 | 0.0000222828 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_1157 | 3 | 6 | 0.000255735 |
| Cicer arietinum L. | Ca_LG5_v3 | 5 | CH_car_375 | 3 | 8 | 0.000578541 |
| Corylus avellana | 9 | 5 | CH_cav_231 | 4 | 8 | 0.000000129008 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_428 | 3 | 3 | 0.00000785289 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 5 | CH_eca_801 | 3 | 9 | 0.000658024 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_402 | 5 | 15 | 0.0000000328581 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_752 | 3 | 3 | 0.0000221307 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_583 | 3 | 3 | 0.0000362192 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_1227 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1884 | 3 | 9 | 0.0000492888 |
| Selaginella moellendorffii | scaffold_0 | 5 | CH_smo_231 | 3 | 14 | 0.0000950471 |
| Solanum tuberosum | ST4.03ch10 | 5 | CH_stu_631 | 3 | 5 | 0.0000606165 |
| Vanilla planifolia | CM028154.1 | 5 | CH_vpl_572 | 4 | 36 | 0.000272112 |
| Aethionema arabicum | LG-2 | 6 | CH_aar_109 | 4 | 4 | 0.00000000414669 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_127 | 4 | 4 | 0.000000000516049 |
| Brassica carinata | Contig74 | 6 | CH_bca_1151 | 3 | 3 | 0.0000222828 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_1157 | 3 | 6 | 0.000255735 |
| Cicer arietinum L. | Ca_LG5_v3 | 6 | CH_car_375 | 3 | 8 | 0.000578541 |
| Corylus avellana | 9 | 6 | CH_cav_231 | 4 | 8 | 0.000000129008 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_428 | 3 | 3 | 0.00000785289 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 6 | CH_eca_801 | 3 | 9 | 0.000658024 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_402 | 5 | 15 | 0.0000000328581 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_752 | 3 | 3 | 0.0000221307 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_583 | 3 | 3 | 0.0000362192 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_1227 | 3 | 3 | 0.000000587373 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1884 | 3 | 9 | 0.0000492888 |
| Selaginella moellendorffii | scaffold_0 | 6 | CH_smo_231 | 3 | 14 | 0.0000950471 |
| Solanum tuberosum | ST4.03ch10 | 6 | CH_stu_631 | 3 | 5 | 0.0000606165 |
| Vanilla planifolia | CM028154.1 | 6 | CH_vpl_572 | 4 | 36 | 0.000272112 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |