Functional clusters
Information
- Type InterPro
- Description Pyridoxal phosphate-dependent transferase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_535 | 3 | 3 | 0.000733995 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_138 | 6 | 6 | 0.0000000000350912 |
| Gossypium hirsutum | D02 | 5 | CH_ghi_713 | 4 | 4 | 0.0000109585 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_1176 | 3 | 3 | 0.000607489 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1668 | 6 | 44 | 0.00050922 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_1415 | 3 | 3 | 0.000636302 |
| Solanum pennellii | Spenn-ch08 | 5 | CH_spe_86 | 8 | 15 | 0.00000000000075657 |
| Theobroma cacao | Chromosome_2 | 5 | CH_tca_346 | 5 | 8 | 0.000000443206 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_535 | 3 | 3 | 0.000733995 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_138 | 6 | 6 | 0.0000000000350912 |
| Gossypium hirsutum | D02 | 6 | CH_ghi_713 | 4 | 4 | 0.0000109585 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_1176 | 3 | 3 | 0.000607489 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1668 | 6 | 44 | 0.00050922 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_1415 | 3 | 3 | 0.000636302 |
| Solanum pennellii | Spenn-ch08 | 6 | CH_spe_86 | 8 | 15 | 0.00000000000075657 |
| Theobroma cacao | Chromosome_2 | 6 | CH_tca_346 | 5 | 8 | 0.000000443206 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |