Functional clusters

Information

  • Type InterPro
  • Description Rubisco LSMT, substrate-binding domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus A09 5 CH_bna_578 3 4 0.000000940502
Eucalyptus grandis Chr02 5 CH_egr_1334 3 13 0.000533476
Solanum lycopersicum SL4.0ch05 5 CH_sly_894 2 2 0.000586941
Solanum pennellii Spenn-ch05 5 CH_spe_853 2 2 0.000667186
Theobroma cacao Chromosome_1 5 CH_tca_470 3 9 0.0000236349
Brassica napus A09 6 CH_bna_578 3 4 0.000000940502
Eucalyptus grandis Chr02 6 CH_egr_1334 3 13 0.000533476
Solanum lycopersicum SL4.0ch05 6 CH_sly_894 2 2 0.000586941
Solanum pennellii Spenn-ch05 6 CH_spe_853 2 2 0.000667186
Theobroma cacao Chromosome_1 6 CH_tca_470 3 9 0.0000236349

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001