Functional clusters
Information
- Type InterPro
- Description Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cicer arietinum L. | Ca_LG1_v3 | 5 | CH_car_118 | 3 | 5 | 0.00000181687 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_186 | 4 | 4 | 0.000000000115933 |
| Carpinus fangiana | Cfa01 | 5 | CH_cfa_238 | 3 | 3 | 0.000000172079 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_403 | 3 | 3 | 0.000000950893 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_486 | 5 | 16 | 0.000000000177281 |
| Erythranthe guttata | scaffold_10 | 5 | CH_egut_316 | 3 | 3 | 0.000000445382 |
| Lupinus albus | Lalb_Chr23 | 5 | CH_lal_71 | 5 | 5 | 0.0000000000030236 |
| Lotus japonicus | chr4 | 5 | CH_lja_289 | 3 | 4 | 0.00000257672 |
| Medicago truncatula | chr2 | 5 | CH_mtr_756 | 3 | 5 | 0.00000303784 |
| Petunia axillaris | Peaxi162Scf00498 | 5 | CH_pax_504 | 3 | 19 | 0.000143636 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_416 | 3 | 12 | 0.0000502299 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1400 | 2 | 2 | 0.000597979 |
| Vitis vinifera | chr7 | 5 | CH_vvi_310 | 4 | 13 | 0.000000310835 |
| Cicer arietinum L. | Ca_LG1_v3 | 6 | CH_car_118 | 3 | 5 | 0.00000181687 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_186 | 4 | 4 | 0.000000000115933 |
| Carpinus fangiana | Cfa01 | 6 | CH_cfa_238 | 3 | 3 | 0.000000172079 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_403 | 3 | 3 | 0.000000950893 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_486 | 5 | 16 | 0.000000000177281 |
| Erythranthe guttata | scaffold_10 | 6 | CH_egut_316 | 3 | 3 | 0.000000445382 |
| Lupinus albus | Lalb_Chr23 | 6 | CH_lal_71 | 5 | 5 | 0.0000000000030236 |
| Lotus japonicus | chr4 | 6 | CH_lja_289 | 3 | 4 | 0.00000257672 |
| Medicago truncatula | chr2 | 6 | CH_mtr_756 | 3 | 5 | 0.00000303784 |
| Petunia axillaris | Peaxi162Scf00498 | 6 | CH_pax_504 | 3 | 19 | 0.000143636 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_416 | 3 | 12 | 0.0000502299 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1400 | 2 | 2 | 0.000597979 |
| Vitis vinifera | chr7 | 6 | CH_vvi_310 | 4 | 13 | 0.000000310835 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |