Functional clusters
Information
- Type InterPro
- Description RmlC-like jelly roll fold
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold793 | 5 | CH_can_266 | 6 | 10 | 0.0000000272108 |
| Coffea canephora | chr10 | 5 | CH_ccan_653 | 4 | 58 | 0.000541683 |
| Carpinus fangiana | Cfa08 | 5 | CH_cfa_339 | 4 | 4 | 0.00000725075 |
| Helianthus annuus | HanXRQChr03 | 5 | CH_han_630 | 4 | 4 | 0.00000410971 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_123 | 16 | 74 | 7.74043e-18 |
| Phaseolus vulgaris | Chr08 | 5 | CH_pvu_47 | 10 | 10 | 1.04461e-20 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_324 | 6 | 18 | 0.000000289612 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_267 | 9 | 9 | 1.63186e-17 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_254 | 5 | 5 | 0.0000000136633 |
| Selaginella moellendorffii | scaffold_39 | 5 | CH_smo_70 | 6 | 9 | 0.0000000201201 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_882 | 4 | 9 | 0.00055287 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_19 | 8 | 8 | 7.97541e-17 |
| Capsicum annuum | PGAv.1.6.scaffold793 | 6 | CH_can_266 | 6 | 10 | 0.0000000272108 |
| Coffea canephora | chr10 | 6 | CH_ccan_653 | 4 | 58 | 0.000541683 |
| Carpinus fangiana | Cfa08 | 6 | CH_cfa_339 | 4 | 4 | 0.00000725075 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_469 | 6 | 13 | 0.00000163507 |
| Fragaria x ananassa | Fvb5-2 | 6 | CH_fan_936 | 4 | 5 | 0.000235903 |
| Helianthus annuus | HanXRQChr03 | 6 | CH_han_630 | 4 | 4 | 0.00000410971 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_123 | 16 | 74 | 7.74043e-18 |
| Phaseolus vulgaris | Chr08 | 6 | CH_pvu_47 | 10 | 10 | 1.04461e-20 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_324 | 6 | 18 | 0.000000289612 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_267 | 9 | 9 | 1.63186e-17 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_254 | 5 | 5 | 0.0000000136633 |
| Selaginella moellendorffii | scaffold_39 | 6 | CH_smo_70 | 6 | 9 | 0.0000000201201 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_882 | 4 | 9 | 0.00055287 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_19 | 8 | 8 | 7.97541e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |