Functional clusters

Information

  • Type InterPro
  • Description Extradiol aromatic ring-opening dioxygenase, DODA-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_1104 2 2 0.000299383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_1105 2 2 0.000299383
Brassica oleracea C6 5 CH_bol_853 2 2 0.000686409
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_110 4 9 0.0000000010723
Populus trichocarpa Chr04 5 CH_ptr_688 2 2 0.000346801
Sequoiadendron giganteum chr3 5 CH_sgi_2094 2 2 0.000146145
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_1104 2 2 0.000299383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_1105 2 2 0.000299383
Brassica oleracea C6 6 CH_bol_853 2 2 0.000686409
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_110 4 9 0.0000000010723
Populus trichocarpa Chr04 6 CH_ptr_688 2 2 0.000346801
Sequoiadendron giganteum chr3 6 CH_sgi_2094 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001