Functional clusters

Information

  • Type InterPro
  • Description Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 5 CH_acertr_760 2 2 0.000211491
Amborella trichopoda AmTr_v1.0_scaffold00038 5 CH_atr_500 2 2 0.000238322
Medicago truncatula chr5 5 CH_mtr_1396 2 3 0.000739518
Olea europaea chr12 5 CH_oeu_449 2 2 0.000160137
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1241 2 2 0.000239192
Sequoiadendron giganteum chr7 5 CH_sgi_2446 2 2 0.000487151
Schrenkiella parvula ch1-1 5 CH_spa_330 2 2 0.000472404
Acer truncatum chr9 6 CH_acertr_760 2 2 0.000211491
Amborella trichopoda AmTr_v1.0_scaffold00038 6 CH_atr_500 2 2 0.000238322
Medicago truncatula chr5 6 CH_mtr_1396 2 3 0.000739518
Olea europaea chr12 6 CH_oeu_449 2 2 0.000160137
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1241 2 2 0.000239192
Sequoiadendron giganteum chr7 6 CH_sgi_2446 2 2 0.000487151
Schrenkiella parvula ch1-1 6 CH_spa_330 2 2 0.000472404

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001