Functional clusters
Information
- Type InterPro
- Description Glutaredoxin subgroup
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-9 | 5 | CH_aar_201 | 3 | 3 | 0.00000357089 |
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_401 | 3 | 4 | 0.00003475 |
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_50 | 6 | 6 | 0.00000000000000153004 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 5 | CH_amhyb_202 | 3 | 5 | 0.0000594664 |
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_91 | 4 | 5 | 0.000000000974837 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_296 | 3 | 4 | 0.00000334826 |
| Arabidopsis thaliana | Chr4 | 5 | CH_ath_59 | 5 | 5 | 0.0000000000000312679 |
| Brassica carinata | ChrC07 | 5 | CH_bca_230 | 6 | 20 | 0.000000000125574 |
| Brassica carinata | ChrC09 | 5 | CH_bca_485 | 4 | 5 | 0.0000000537925 |
| Brassica napus | A09 | 5 | CH_bna_1033 | 3 | 4 | 0.0000743689 |
| Brassica napus | C08 | 5 | CH_bna_1034 | 3 | 4 | 0.0000743689 |
| Brassica oleracea | C1 | 5 | CH_bol_413 | 3 | 3 | 0.00000650657 |
| Brassica oleracea | C8 | 5 | CH_bol_498 | 3 | 4 | 0.0000260172 |
| Brassica rapa | A09 | 5 | CH_bra_347 | 3 | 4 | 0.0000448784 |
| Cicer arietinum L. | Ca_LG3_v3 | 5 | CH_car_76 | 4 | 8 | 0.000000179915 |
| Cardamine hirsuta | NSCAFB.163 | 5 | CH_chi_102 | 5 | 5 | 0.00000000000105957 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_417 | 3 | 4 | 0.0000194857 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_36 | 8 | 12 | 2.19199e-19 |
| Gossypium hirsutum | A10 | 5 | CH_ghi_698 | 3 | 3 | 0.00000902208 |
| Gossypium hirsutum | D10 | 5 | CH_ghi_699 | 3 | 3 | 0.00000902208 |
| Glycine max | Gm10 | 5 | CH_gma_114 | 5 | 5 | 0.00000000000184872 |
| Glycine max | Gm02 | 5 | CH_gma_483 | 3 | 3 | 0.00000789627 |
| Gossypium raimondii | Chr11 | 5 | CH_gra_343 | 3 | 3 | 0.00000491485 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_1138 | 2 | 2 | 0.000598874 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_535 | 3 | 3 | 0.0000129833 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 5 | CH_lsa_741 | 3 | 6 | 0.00025927 |
| Manihot esculenta | Chromosome05 | 5 | CH_mes_445 | 3 | 4 | 0.0000182495 |
| Medicago truncatula | chr4 | 5 | CH_mtr_689 | 3 | 3 | 0.00000115214 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_214 | 4 | 8 | 0.0000000153011 |
| Punica granatum | NC_045132.1 | 5 | CH_pgr_355 | 3 | 4 | 0.0000122929 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_1 | 18 | 26 | 2.13304e-50 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_77 | 7 | 8 | 4.4085e-18 |
| Populus trichocarpa | Chr08 | 5 | CH_ptr_429 | 3 | 3 | 0.00000340777 |
| Phaseolus vulgaris | Chr01 | 5 | CH_pvu_193 | 4 | 5 | 0.00000000811882 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_13 | 11 | 11 | 1.4633e-31 |
| Schrenkiella parvula | ch7-4 | 5 | CH_spa_30 | 5 | 5 | 0.0000000000012592 |
| Solanum pennellii | Spenn-ch04 | 5 | CH_spe_27 | 8 | 10 | 2.39338e-21 |
| Aethionema arabicum | LG-9 | 6 | CH_aar_201 | 3 | 3 | 0.00000357089 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_401 | 3 | 4 | 0.00003475 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_50 | 6 | 6 | 0.00000000000000153004 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 6 | CH_amhyb_202 | 3 | 5 | 0.0000594664 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_91 | 4 | 5 | 0.000000000974837 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_296 | 3 | 4 | 0.00000334826 |
| Arabidopsis thaliana | Chr4 | 6 | CH_ath_59 | 5 | 5 | 0.0000000000000312679 |
| Brassica carinata | ChrC07 | 6 | CH_bca_230 | 6 | 20 | 0.000000000125574 |
| Brassica carinata | ChrC09 | 6 | CH_bca_485 | 4 | 5 | 0.0000000537925 |
| Brassica napus | A09 | 6 | CH_bna_1033 | 3 | 4 | 0.0000743689 |
| Brassica napus | C08 | 6 | CH_bna_1034 | 3 | 4 | 0.0000743689 |
| Brassica oleracea | C1 | 6 | CH_bol_413 | 3 | 3 | 0.00000650657 |
| Brassica oleracea | C8 | 6 | CH_bol_498 | 3 | 4 | 0.0000260172 |
| Brassica rapa | A09 | 6 | CH_bra_347 | 3 | 4 | 0.0000448784 |
| Cicer arietinum L. | Ca_LG3_v3 | 6 | CH_car_76 | 4 | 8 | 0.000000179915 |
| Cardamine hirsuta | NSCAFB.163 | 6 | CH_chi_102 | 5 | 5 | 0.00000000000105957 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_417 | 3 | 4 | 0.0000194857 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_36 | 8 | 12 | 2.19199e-19 |
| Gossypium hirsutum | A10 | 6 | CH_ghi_698 | 3 | 3 | 0.00000902208 |
| Gossypium hirsutum | D10 | 6 | CH_ghi_699 | 3 | 3 | 0.00000902208 |
| Glycine max | Gm10 | 6 | CH_gma_114 | 5 | 5 | 0.00000000000184872 |
| Glycine max | Gm02 | 6 | CH_gma_483 | 3 | 3 | 0.00000789627 |
| Gossypium raimondii | Chr11 | 6 | CH_gra_343 | 3 | 3 | 0.00000491485 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_1138 | 2 | 2 | 0.000598874 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_535 | 3 | 3 | 0.0000129833 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 6 | CH_lsa_741 | 3 | 6 | 0.00025927 |
| Manihot esculenta | Chromosome05 | 6 | CH_mes_445 | 3 | 4 | 0.0000182495 |
| Medicago truncatula | chr4 | 6 | CH_mtr_689 | 3 | 3 | 0.00000115214 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_214 | 4 | 8 | 0.0000000153011 |
| Punica granatum | NC_045132.1 | 6 | CH_pgr_355 | 3 | 4 | 0.0000122929 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_1 | 18 | 26 | 2.13304e-50 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_77 | 7 | 8 | 4.4085e-18 |
| Populus trichocarpa | Chr08 | 6 | CH_ptr_429 | 3 | 3 | 0.00000340777 |
| Phaseolus vulgaris | Chr01 | 6 | CH_pvu_193 | 4 | 5 | 0.00000000811882 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_13 | 11 | 11 | 1.4633e-31 |
| Schrenkiella parvula | ch7-4 | 6 | CH_spa_30 | 5 | 5 | 0.0000000000012592 |
| Solanum pennellii | Spenn-ch04 | 6 | CH_spe_27 | 8 | 10 | 2.39338e-21 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |