Functional clusters

Information

  • Type InterPro
  • Description Alpha-amylase, plant

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr9_EL10_PGA_scaffold8 5 CH_bvu_64 5 14 0.000000000000705374
Cicer arietinum L. Ca_LG4_v3 5 CH_car_244 3 28 0.000118869
Carpinus fangiana Cfa07 5 CH_cfa_232 3 4 0.000000137654
Carya illinoinensis Chr02 5 CH_cil_797 2 2 0.000619828
Chenopodium quinoa C_Quinoa_Scaffold_1040 5 CH_cqu_546 3 9 0.00000989535
Eucalyptus grandis Chr06 5 CH_egr_1168 2 2 0.000175582
Gossypium hirsutum A01 5 CH_ghi_1245 2 2 0.000747644
Lupinus albus Lalb_Chr14 5 CH_lal_150 3 3 0.0000000165269
Lotus japonicus chr5 5 CH_lja_462 2 2 0.000214523
Oryza sativa ssp. japonica chr09 5 CH_osa_300 3 5 0.000000585672
Punica granatum NC_045127.1 5 CH_pgr_485 2 2 0.000225107
Theobroma cacao Chromosome_8 5 CH_tca_274 3 3 0.0000000321845
Beta vulgaris Chr9_EL10_PGA_scaffold8 6 CH_bvu_64 5 14 0.000000000000705374
Cicer arietinum L. Ca_LG4_v3 6 CH_car_244 3 28 0.000118869
Carpinus fangiana Cfa07 6 CH_cfa_232 3 4 0.000000137654
Carya illinoinensis Chr02 6 CH_cil_797 2 2 0.000619828
Chenopodium quinoa C_Quinoa_Scaffold_1040 6 CH_cqu_546 3 9 0.00000989535
Eucalyptus grandis Chr06 6 CH_egr_1168 2 2 0.000175582
Gossypium hirsutum A01 6 CH_ghi_1245 2 2 0.000747644
Lupinus albus Lalb_Chr14 6 CH_lal_150 3 3 0.0000000165269
Lotus japonicus chr5 6 CH_lja_462 2 2 0.000214523
Oryza sativa ssp. japonica chr09 6 CH_osa_300 3 5 0.000000585672
Punica granatum NC_045127.1 6 CH_pgr_485 2 2 0.000225107
Theobroma cacao Chromosome_8 6 CH_tca_274 3 3 0.0000000321845

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001