Functional clusters
Information
- Type InterPro
- Description Wall-associated receptor kinase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-7 | 5 | CH_aar_98 | 5 | 12 | 0.000000000325298 |
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_137 | 5 | 13 | 0.000000000366022 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_38 | 7 | 23 | 3.65848e-17 |
| Brassica carinata | ChrB07 | 5 | CH_bca_254 | 5 | 10 | 0.000000000259275 |
| Brassica carinata | Contig1162 | 5 | CH_bca_412 | 4 | 5 | 0.0000000133866 |
| Brassica carinata | ChrC09 | 5 | CH_bca_990 | 3 | 3 | 0.0000067721 |
| Brassica carinata | ChrB03 | 5 | CH_bca_991 | 3 | 3 | 0.0000067721 |
| Brassica napus | C08 | 5 | CH_bna_483 | 4 | 9 | 0.000000198569 |
| Brassica napus | A09 | 5 | CH_bna_725 | 3 | 3 | 0.0000047231 |
| Brassica oleracea | C8 | 5 | CH_bol_225 | 4 | 9 | 0.0000000511124 |
| Brassica rapa | A09 | 5 | CH_bra_231 | 3 | 3 | 0.00000188 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_10 | 15 | 78 | 6.33885e-38 |
| Corylus avellana | 9 | 5 | CH_cav_396 | 4 | 33 | 0.0000115449 |
| Citrus clementina | scaffold_5 | 5 | CH_ccl_613 | 2 | 3 | 0.000246083 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_805 | 3 | 12 | 0.000715158 |
| Carya illinoinensis | Chr04 | 5 | CH_cil_16 | 13 | 27 | 1.99211e-32 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_127 | 5 | 12 | 0.0000000000783237 |
| Davidia involucrata | GWHABJS00000015 | 5 | CH_din_286 | 4 | 11 | 0.000000478959 |
| Eucalyptus grandis | Chr06 | 5 | CH_egr_78 | 12 | 28 | 5.28957e-28 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_293 | 3 | 9 | 0.0000255503 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_520 | 3 | 8 | 0.0000349505 |
| Helianthus annuus | HanXRQChr09 | 5 | CH_han_368 | 4 | 5 | 0.0000000109463 |
| Helianthus annuus | HanXRQChr09 | 5 | CH_han_652 | 3 | 3 | 0.00000515188 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_255 | 7 | 65 | 0.0000000000285224 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_302 | 5 | 13 | 0.000000000541109 |
| Lonicera japonica | GWHAAZE00000008 | 5 | CH_lonja_806 | 3 | 6 | 0.0000601969 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_1058 | 4 | 78 | 0.000345385 |
| Manihot esculenta | Chromosome11 | 5 | CH_mes_64 | 8 | 12 | 6.35031e-21 |
| Petunia axillaris | Peaxi162Scf00391 | 5 | CH_pax_427 | 2 | 2 | 0.0000703556 |
| Papaver somniferum | NW_020619603.1 | 5 | CH_pso_849 | 3 | 8 | 0.0000485681 |
| Populus trichocarpa | Chr01 | 5 | CH_ptr_43 | 10 | 20 | 4.99099e-23 |
| Populus trichocarpa | Chr03 | 5 | CH_ptr_57 | 9 | 17 | 1.33733e-20 |
| Quercus lobata | 4 | 5 | CH_qlo_883 | 5 | 20 | 0.000000470378 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_934 | 2 | 3 | 0.000580745 |
| Salvia bowleyana | GWHASIU00000003 | 5 | CH_sbo_766 | 2 | 3 | 0.00081892 |
| Salix brachista | GWHAAZH00000001 | 5 | CH_sbr_133 | 5 | 13 | 0.0000000000383093 |
| Salix brachista | GWHAAZH00000009 | 5 | CH_sbr_330 | 3 | 4 | 0.00000285847 |
| Selenicereus undatus | Scaffold_33675 | 5 | CH_sun_229 | 3 | 49 | 0.00014568 |
| Trochodendron aralioides | group14 | 5 | CH_tar_157 | 4 | 5 | 0.0000000044298 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_621 | 2 | 2 | 0.000219716 |
| Tripterygium wilfordii | NC_052249.1 | 5 | CH_twi_482 | 2 | 3 | 0.000501733 |
| Aethionema arabicum | LG-7 | 6 | CH_aar_98 | 5 | 12 | 0.000000000325298 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_137 | 5 | 13 | 0.000000000366022 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_38 | 7 | 23 | 3.65848e-17 |
| Brassica carinata | ChrB07 | 6 | CH_bca_254 | 5 | 10 | 0.000000000259275 |
| Brassica carinata | Contig1162 | 6 | CH_bca_412 | 4 | 5 | 0.0000000133866 |
| Brassica carinata | ChrC09 | 6 | CH_bca_990 | 3 | 3 | 0.0000067721 |
| Brassica carinata | ChrB03 | 6 | CH_bca_991 | 3 | 3 | 0.0000067721 |
| Brassica napus | C08 | 6 | CH_bna_483 | 4 | 9 | 0.000000198569 |
| Brassica napus | A09 | 6 | CH_bna_725 | 3 | 3 | 0.0000047231 |
| Brassica oleracea | C8 | 6 | CH_bol_225 | 4 | 9 | 0.0000000511124 |
| Brassica rapa | A09 | 6 | CH_bra_231 | 3 | 3 | 0.00000188 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_10 | 15 | 78 | 6.33885e-38 |
| Corylus avellana | 9 | 6 | CH_cav_396 | 4 | 33 | 0.0000115449 |
| Citrus clementina | scaffold_5 | 6 | CH_ccl_613 | 2 | 3 | 0.000246083 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_805 | 3 | 12 | 0.000715158 |
| Carya illinoinensis | Chr04 | 6 | CH_cil_16 | 13 | 27 | 1.99211e-32 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_127 | 5 | 12 | 0.0000000000783237 |
| Davidia involucrata | GWHABJS00000015 | 6 | CH_din_286 | 4 | 11 | 0.000000478959 |
| Eucalyptus grandis | Chr06 | 6 | CH_egr_78 | 12 | 28 | 5.28957e-28 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_293 | 3 | 9 | 0.0000255503 |
| Fragaria x ananassa | Fvb6-1 | 6 | CH_fan_229 | 4 | 6 | 0.0000000036053 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_520 | 3 | 8 | 0.0000349505 |
| Helianthus annuus | HanXRQChr09 | 6 | CH_han_368 | 4 | 5 | 0.0000000109463 |
| Helianthus annuus | HanXRQChr09 | 6 | CH_han_652 | 3 | 3 | 0.00000515188 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_255 | 7 | 65 | 0.0000000000285224 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_302 | 5 | 13 | 0.000000000541109 |
| Lonicera japonica | GWHAAZE00000008 | 6 | CH_lonja_806 | 3 | 6 | 0.0000601969 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_1058 | 4 | 78 | 0.000345385 |
| Manihot esculenta | Chromosome11 | 6 | CH_mes_64 | 8 | 12 | 6.35031e-21 |
| Petunia axillaris | Peaxi162Scf00391 | 6 | CH_pax_427 | 2 | 2 | 0.0000703556 |
| Papaver somniferum | NW_020619603.1 | 6 | CH_pso_849 | 3 | 8 | 0.0000485681 |
| Populus trichocarpa | Chr01 | 6 | CH_ptr_43 | 10 | 20 | 4.99099e-23 |
| Populus trichocarpa | Chr03 | 6 | CH_ptr_57 | 9 | 17 | 1.33733e-20 |
| Quercus lobata | 4 | 6 | CH_qlo_883 | 5 | 20 | 0.000000470378 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_934 | 2 | 3 | 0.000580745 |
| Salvia bowleyana | GWHASIU00000003 | 6 | CH_sbo_766 | 2 | 3 | 0.00081892 |
| Salix brachista | GWHAAZH00000001 | 6 | CH_sbr_133 | 5 | 13 | 0.0000000000383093 |
| Salix brachista | GWHAAZH00000009 | 6 | CH_sbr_330 | 3 | 4 | 0.00000285847 |
| Selenicereus undatus | Scaffold_33675 | 6 | CH_sun_229 | 3 | 49 | 0.00014568 |
| Trochodendron aralioides | group14 | 6 | CH_tar_157 | 4 | 5 | 0.0000000044298 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_621 | 2 | 2 | 0.000219716 |
| Tripterygium wilfordii | NC_052249.1 | 6 | CH_twi_482 | 2 | 3 | 0.000501733 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |