Functional clusters

Information

  • Type InterPro
  • Description DNA recombination and repair protein Rad51-like, C-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 5 CH_bca_1214 3 8 0.0000371686
Coffea canephora chr6 5 CH_ccan_515 2 3 0.000153321
Eucalyptus grandis Chr02 5 CH_egr_579 6 67 0.00000000456745
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1069 4 50 0.0001031
Sapria himalayana scaffold26_7557582 5 CH_shi_545 2 2 0.000571804
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_827 3 21 0.000960903
Brassica carinata ChrC01 6 CH_bca_1214 3 8 0.0000371686
Coffea canephora chr6 6 CH_ccan_515 2 3 0.000153321
Eucalyptus grandis Chr02 6 CH_egr_579 6 67 0.00000000456745
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1069 4 50 0.0001031
Sapria himalayana scaffold26_7557582 6 CH_shi_545 2 2 0.000571804
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_827 3 21 0.000960903

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001