Functional clusters
Information
- Type InterPro
- Description FAE1/Type III polyketide synthase-like protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 5 | CH_acertr_68 | 6 | 6 | 0.000000000000150431 |
| Brassica carinata | ChrB05 | 5 | CH_bca_1543 | 3 | 5 | 0.000211307 |
| Daucus carota | DCARv2_Chr9 | 5 | CH_dca_84 | 5 | 5 | 0.0000000000100196 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_218 | 7 | 9 | 3.94189e-17 |
| Helianthus annuus | HanXRQChr09 | 5 | CH_han_743 | 3 | 3 | 0.0000204709 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_656 | 3 | 3 | 0.0000176246 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_345 | 3 | 3 | 0.0000072286 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_1274 | 3 | 10 | 0.000325493 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1460 | 3 | 3 | 0.0000104125 |
| Trochodendron aralioides | group2 | 5 | CH_tar_426 | 3 | 3 | 0.0000140576 |
| Utricularia gibba | unitig_748 | 5 | CH_ugi_5 | 9 | 11 | 1.98987e-20 |
| Acer truncatum | chr4 | 6 | CH_acertr_68 | 6 | 6 | 0.000000000000150431 |
| Brassica carinata | ChrB05 | 6 | CH_bca_1543 | 3 | 5 | 0.000211307 |
| Daucus carota | DCARv2_Chr9 | 6 | CH_dca_84 | 5 | 5 | 0.0000000000100196 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_218 | 7 | 9 | 3.94189e-17 |
| Fragaria x ananassa | Fvb7-1 | 6 | CH_fan_1116 | 3 | 6 | 0.000561468 |
| Fragaria x ananassa | Fvb7-3 | 6 | CH_fan_970 | 3 | 5 | 0.000280867 |
| Helianthus annuus | HanXRQChr09 | 6 | CH_han_743 | 3 | 3 | 0.0000204709 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_656 | 3 | 3 | 0.0000176246 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_345 | 3 | 3 | 0.0000072286 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_1274 | 3 | 10 | 0.000325493 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1460 | 3 | 3 | 0.0000104125 |
| Trochodendron aralioides | group2 | 6 | CH_tar_426 | 3 | 3 | 0.0000140576 |
| Utricularia gibba | unitig_748 | 6 | CH_ugi_5 | 9 | 11 | 1.98987e-20 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |