Functional clusters
Information
- Type InterPro
- Description Plant PDR ABC transporter associated
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 5 | CH_arhy_879 | 3 | 4 | 0.0000453495 |
| Amborella trichopoda | AmTr_v1.0_scaffold00122 | 5 | CH_atr_325 | 3 | 4 | 0.0000172224 |
| Brassica napus | C07 | 5 | CH_bna_956 | 3 | 5 | 0.0000401362 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_1123 | 3 | 7 | 0.000169766 |
| Camellia sinensis var. sinensis | Chr11 | 5 | CH_camsi_228 | 5 | 7 | 0.000000000018327 |
| Corchorus olitorius | AWUE01014974.1 | 5 | CH_col_49 | 4 | 7 | 0.00000000261685 |
| Erythranthe guttata | scaffold_9 | 5 | CH_egut_297 | 4 | 8 | 0.000000192654 |
| Petunia axillaris | Peaxi162Scf00938 | 5 | CH_pax_574 | 3 | 7 | 0.000211697 |
| Papaver somniferum | NW_020646860.1 | 5 | CH_pso_832 | 3 | 6 | 0.0000395667 |
| Quercus lobata | 4 | 5 | CH_qlo_997 | 5 | 27 | 0.00000212498 |
| Vanilla planifolia | JADCNL010000016.1 | 5 | CH_vpl_483 | 3 | 5 | 0.000165549 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 6 | CH_arhy_879 | 3 | 4 | 0.0000453495 |
| Amborella trichopoda | AmTr_v1.0_scaffold00122 | 6 | CH_atr_325 | 3 | 4 | 0.0000172224 |
| Brassica napus | C07 | 6 | CH_bna_956 | 3 | 5 | 0.0000401362 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_1123 | 3 | 7 | 0.000169766 |
| Camellia sinensis var. sinensis | Chr11 | 6 | CH_camsi_228 | 5 | 7 | 0.000000000018327 |
| Corchorus olitorius | AWUE01014974.1 | 6 | CH_col_49 | 4 | 7 | 0.00000000261685 |
| Erythranthe guttata | scaffold_9 | 6 | CH_egut_297 | 4 | 8 | 0.000000192654 |
| Fragaria x ananassa | Fvb2-3 | 6 | CH_fan_744 | 3 | 4 | 0.0000402512 |
| Petunia axillaris | Peaxi162Scf00938 | 6 | CH_pax_574 | 3 | 7 | 0.000211697 |
| Papaver somniferum | NW_020646860.1 | 6 | CH_pso_832 | 3 | 6 | 0.0000395667 |
| Quercus lobata | 4 | 6 | CH_qlo_997 | 5 | 27 | 0.00000212498 |
| Vanilla planifolia | JADCNL010000016.1 | 6 | CH_vpl_483 | 3 | 5 | 0.000165549 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |