Functional clusters
Information
- Type InterPro
- Description Methyltransferase type 11
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-9 | 5 | CH_aar_225 | 4 | 7 | 0.0000097979 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_329 | 3 | 3 | 0.00000956628 |
| Amborella trichopoda | AmTr_v1.0_scaffold00103 | 5 | CH_atr_328 | 3 | 3 | 0.0000217732 |
| Brassica carinata | ChrB03 | 5 | CH_bca_768 | 4 | 7 | 0.00000117801 |
| Brassica napus | C06 | 5 | CH_bna_226 | 5 | 6 | 0.000000000293023 |
| Brassica napus | A07 | 5 | CH_bna_410 | 4 | 4 | 0.0000000585076 |
| Brassica oleracea | C6 | 5 | CH_bol_268 | 4 | 6 | 0.000000193739 |
| Brassica rapa | A07 | 5 | CH_bra_130 | 4 | 4 | 0.000000029297 |
| Corylus avellana | 10 | 5 | CH_cav_90 | 6 | 8 | 0.000000000000791847 |
| Coffea canephora | chr6 | 5 | CH_ccan_250 | 3 | 6 | 0.00000325569 |
| Coffea canephora | chr6 | 5 | CH_ccan_270 | 4 | 58 | 0.0000045468 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_243 | 5 | 8 | 0.0000000082637 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_344 | 4 | 5 | 0.000000546301 |
| Carpinus fangiana | Cfa07 | 5 | CH_cfa_283 | 4 | 6 | 0.0000012885 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_572 | 3 | 4 | 0.000171398 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_631 | 3 | 4 | 0.000150758 |
| Capsella rubella | scaffold_2 | 5 | CH_cru_221 | 4 | 4 | 0.0000000543863 |
| Davidia involucrata | GWHABJS00000015 | 5 | CH_din_430 | 3 | 3 | 0.0000267891 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_100 | 7 | 8 | 0.00000000000000502214 |
| Glycine max | Gm12 | 5 | CH_gma_768 | 5 | 53 | 0.000233793 |
| Glycine max | Gm06 | 5 | CH_gma_777 | 3 | 4 | 0.000295551 |
| Olea europaea | chr2 | 5 | CH_oeu_386 | 3 | 5 | 0.0000982118 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_326 | 4 | 8 | 0.00000520581 |
| Punica granatum | NC_045129.1 | 5 | CH_pgr_364 | 4 | 10 | 0.0000155863 |
| Phaseolus vulgaris | Chr01 | 5 | CH_pvu_555 | 3 | 4 | 0.00023105 |
| Phaseolus vulgaris | Chr11 | 5 | CH_pvu_705 | 5 | 69 | 0.000869522 |
| Quercus lobata | 3 | 5 | CH_qlo_1319 | 3 | 3 | 0.0000648343 |
| Quercus lobata | 7 | 5 | CH_qlo_1634 | 4 | 21 | 0.000433968 |
| Quercus lobata | 10 | 5 | CH_qlo_279 | 9 | 31 | 0.00000000000000192826 |
| Rhododendron simsii | chr11 | 5 | CH_rsi_829 | 4 | 20 | 0.000226956 |
| Sechium edule | LG04 | 5 | CH_sed_309 | 3 | 3 | 0.0000593223 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_139 | 11 | 23 | 3.37117e-24 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1533 | 3 | 3 | 0.0000276599 |
| Schrenkiella parvula | ch5-6 | 5 | CH_spa_102 | 4 | 4 | 0.0000000766758 |
| Tarenaya hassleriana | NW_010966617.1 | 5 | CH_tha_214 | 3 | 3 | 0.00013483 |
| Tarenaya hassleriana | NW_010971389.1 | 5 | CH_tha_47 | 7 | 20 | 0.000000000059886 |
| Tripterygium wilfordii | NC_052235.1 | 5 | CH_twi_421 | 3 | 4 | 0.000184108 |
| Vanilla planifolia | CM028160.1 | 5 | CH_vpl_331 | 3 | 3 | 0.0000299243 |
| Aethionema arabicum | LG-9 | 6 | CH_aar_225 | 4 | 7 | 0.0000097979 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_329 | 3 | 3 | 0.00000956628 |
| Amborella trichopoda | AmTr_v1.0_scaffold00103 | 6 | CH_atr_328 | 3 | 3 | 0.0000217732 |
| Brassica carinata | ChrB03 | 6 | CH_bca_768 | 4 | 7 | 0.00000117801 |
| Brassica napus | C06 | 6 | CH_bna_226 | 5 | 6 | 0.000000000293023 |
| Brassica napus | A07 | 6 | CH_bna_410 | 4 | 4 | 0.0000000585076 |
| Brassica oleracea | C6 | 6 | CH_bol_268 | 4 | 6 | 0.000000193739 |
| Brassica rapa | A07 | 6 | CH_bra_130 | 4 | 4 | 0.000000029297 |
| Corylus avellana | 10 | 6 | CH_cav_90 | 6 | 8 | 0.000000000000791847 |
| Coffea canephora | chr6 | 6 | CH_ccan_250 | 3 | 6 | 0.00000325569 |
| Coffea canephora | chr6 | 6 | CH_ccan_270 | 4 | 58 | 0.0000045468 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_243 | 5 | 8 | 0.0000000082637 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_344 | 4 | 5 | 0.000000546301 |
| Carpinus fangiana | Cfa07 | 6 | CH_cfa_283 | 4 | 6 | 0.0000012885 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_572 | 3 | 4 | 0.000171398 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_631 | 3 | 4 | 0.000150758 |
| Capsella rubella | scaffold_2 | 6 | CH_cru_221 | 4 | 4 | 0.0000000543863 |
| Davidia involucrata | GWHABJS00000015 | 6 | CH_din_430 | 3 | 3 | 0.0000267891 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_100 | 7 | 8 | 0.00000000000000502214 |
| Glycine max | Gm12 | 6 | CH_gma_768 | 5 | 53 | 0.000233793 |
| Glycine max | Gm06 | 6 | CH_gma_777 | 3 | 4 | 0.000295551 |
| Olea europaea | chr2 | 6 | CH_oeu_386 | 3 | 5 | 0.0000982118 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_326 | 4 | 8 | 0.00000520581 |
| Punica granatum | NC_045129.1 | 6 | CH_pgr_364 | 4 | 10 | 0.0000155863 |
| Phaseolus vulgaris | Chr01 | 6 | CH_pvu_555 | 3 | 4 | 0.00023105 |
| Phaseolus vulgaris | Chr11 | 6 | CH_pvu_705 | 5 | 69 | 0.000869522 |
| Quercus lobata | 3 | 6 | CH_qlo_1319 | 3 | 3 | 0.0000648343 |
| Quercus lobata | 7 | 6 | CH_qlo_1634 | 4 | 21 | 0.000433968 |
| Quercus lobata | 10 | 6 | CH_qlo_279 | 9 | 31 | 0.00000000000000192826 |
| Rhododendron simsii | chr11 | 6 | CH_rsi_829 | 4 | 20 | 0.000226956 |
| Sechium edule | LG04 | 6 | CH_sed_309 | 3 | 3 | 0.0000593223 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_139 | 11 | 23 | 3.37117e-24 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1533 | 3 | 3 | 0.0000276599 |
| Schrenkiella parvula | ch5-6 | 6 | CH_spa_102 | 4 | 4 | 0.0000000766758 |
| Tarenaya hassleriana | NW_010966617.1 | 6 | CH_tha_214 | 3 | 3 | 0.00013483 |
| Tarenaya hassleriana | NW_010971389.1 | 6 | CH_tha_47 | 7 | 20 | 0.000000000059886 |
| Tripterygium wilfordii | NC_052235.1 | 6 | CH_twi_421 | 3 | 4 | 0.000184108 |
| Vanilla planifolia | CM028160.1 | 6 | CH_vpl_331 | 3 | 3 | 0.0000299243 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |