Functional clusters

Information

  • Type InterPro
  • Description Lipin/Ned1/Smp2 (LNS2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Manihot esculenta Chromosome05 5 CH_mes_571 2 2 0.000183189
Nicotiana tabacum Nitab4.5_0000686 5 CH_nta_305 2 2 0.000658364
Physcomitrium patens Chr11 5 CH_ppa_223 2 2 0.000183818
Simmondsia chinensis GWHAASQ00000020 5 CH_sci_376 2 2 0.000255428
Sequoiadendron giganteum chr7 5 CH_sgi_2406 2 2 0.000487151
Sequoiadendron giganteum chr4 5 CH_sgi_985 3 3 0.0000000355983
Solanum lycopersicum SL4.0ch04 5 CH_sly_793 2 2 0.000352164
Solanum pennellii Spenn-ch04 5 CH_spe_706 2 2 0.000266874
Vigna mungo CM024071.1 5 CH_vmu_588 2 2 0.000646141
Vanilla planifolia CM028159.1 5 CH_vpl_524 2 2 0.000221664
Manihot esculenta Chromosome05 6 CH_mes_571 2 2 0.000183189
Nicotiana tabacum Nitab4.5_0000686 6 CH_nta_305 2 2 0.000658364
Physcomitrium patens Chr11 6 CH_ppa_223 2 2 0.000183818
Simmondsia chinensis GWHAASQ00000020 6 CH_sci_376 2 2 0.000255428
Sequoiadendron giganteum chr7 6 CH_sgi_2406 2 2 0.000487151
Sequoiadendron giganteum chr4 6 CH_sgi_985 3 3 0.0000000355983
Solanum lycopersicum SL4.0ch04 6 CH_sly_793 2 2 0.000352164
Solanum pennellii Spenn-ch04 6 CH_spe_706 2 2 0.000266874
Vigna mungo CM024071.1 6 CH_vmu_588 2 2 0.000646141
Vanilla planifolia CM028159.1 6 CH_vpl_524 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001